RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 COA5Q86WW8 74 aa5.7□□□□□ -1.5
PSMD4-212ENST00000491857 TNP1P09430 55 aa5.68□□□□□ -1.5
PSMD4-212ENST00000491857 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
PSMD4-212ENST00000491857 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PSMD4-212ENST00000491857 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
PSMD4-212ENST00000491857 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
PSMD4-212ENST00000491857 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
PSMD4-212ENST00000491857 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
PSMD4-212ENST00000491857 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
PSMD4-212ENST00000491857 A8MU10 97 aa5.5□□□□□ -1.53
PSMD4-212ENST00000491857 SYNE1Q8NF91 8797 aaKnown RBP5.45□□□□□ -1.54
PSMD4-212ENST00000491857 A0A1B0GU69 56 aa5.45□□□□□ -1.54
PSMD4-212ENST00000491857 ANAPC13Q9BS18 74 aa5.4□□□□□ -1.54
PSMD4-212ENST00000491857 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
PSMD4-212ENST00000491857 COX7CP15954 63 aa5.34□□□□□ -1.55
PSMD4-212ENST00000491857 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
PSMD4-212ENST00000491857 H7BZZ5 65 aa5.25□□□□□ -1.57
PSMD4-212ENST00000491857 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
PSMD4-212ENST00000491857 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
PSMD4-212ENST00000491857 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
PSMD4-212ENST00000491857 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
PSMD4-212ENST00000491857 PRR15LQ9BU68 103 aa5.18□□□□□ -1.58
PSMD4-212ENST00000491857 TMEM258P61165 79 aa5.17□□□□□ -1.58
PSMD4-212ENST00000491857 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
PSMD4-212ENST00000491857 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
PSMD4-212ENST00000491857 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
PSMD4-212ENST00000491857 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
PSMD4-212ENST00000491857 V9GYY9 64 aa5.14□□□□□ -1.59
PSMD4-212ENST00000491857 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
PSMD4-212ENST00000491857 RPS28P62857 69 aaKnown RBP5.1□□□□□ -1.59
PSMD4-212ENST00000491857 MT1AP04731 61 aa5.09□□□□□ -1.59
PSMD4-212ENST00000491857 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
PSMD4-212ENST00000491857 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
PSMD4-212ENST00000491857 PRO0628Q9UI54 55 aa5.05□□□□□ -1.6
PSMD4-212ENST00000491857 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
PSMD4-212ENST00000491857 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
PSMD4-212ENST00000491857 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
PSMD4-212ENST00000491857 UQCR11O14957 56 aa4.98□□□□□ -1.61
PSMD4-212ENST00000491857 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
PSMD4-212ENST00000491857 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
PSMD4-212ENST00000491857 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
PSMD4-212ENST00000491857 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
PSMD4-212ENST00000491857 K7ERS5 55 aa4.86□□□□□ -1.63
PSMD4-212ENST00000491857 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
PSMD4-212ENST00000491857 Q1T7F1 81 aa4.79□□□□□ -1.64
PSMD4-212ENST00000491857 PMAIP1Q13794 54 aa4.78□□□□□ -1.64
PSMD4-212ENST00000491857 H3BS24 57 aa4.75□□□□□ -1.65
PSMD4-212ENST00000491857 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
PSMD4-212ENST00000491857 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
PSMD4-212ENST00000491857 MT3P25713 68 aa4.69□□□□□ -1.66
PSMD4-212ENST00000491857 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
PSMD4-212ENST00000491857 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
PSMD4-212ENST00000491857 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
PSMD4-212ENST00000491857 PSPHP1O15172 72 aa4.54□□□□□ -1.68
PSMD4-212ENST00000491857 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
PSMD4-212ENST00000491857 A6NED7 52 aa4.45□□□□□ -1.7
PSMD4-212ENST00000491857 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
PSMD4-212ENST00000491857 ROMO1P60602 79 aa4.39□□□□□ -1.71
PSMD4-212ENST00000491857 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
PSMD4-212ENST00000491857 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
PSMD4-212ENST00000491857 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
PSMD4-212ENST00000491857 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
PSMD4-212ENST00000491857 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
PSMD4-212ENST00000491857 PRAC1Q96KF2 57 aa3.87□□□□□ -1.79
PSMD4-212ENST00000491857 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
PSMD4-212ENST00000491857 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
PSMD4-212ENST00000491857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
PSMD4-212ENST00000491857 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
PSMD4-212ENST00000491857 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
PSMD4-212ENST00000491857 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
PSMD4-212ENST00000491857 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
PSMD4-212ENST00000491857 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
PSMD4-212ENST00000491857 INE1O15225 51 aa3.21□□□□□ -1.9
PSMD4-212ENST00000491857 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
PSMD4-212ENST00000491857 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
PSMD4-212ENST00000491857 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PSMD4-212ENST00000491857 PRM1P04553 51 aa2.2□□□□□ -2.06
PSMD4-212ENST00000491857 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 71.8 ms