RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
EXD3-212ENST00000491734 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
EXD3-212ENST00000491734 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
EXD3-212ENST00000491734 KRTAP2-1Q9BYU5 128 aa6.31□□□□□ -1.4
EXD3-212ENST00000491734 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
EXD3-212ENST00000491734 MT1LQ93083 61 aa6.29□□□□□ -1.4
EXD3-212ENST00000491734 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
EXD3-212ENST00000491734 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.41
EXD3-212ENST00000491734 SYNE2Q8WXH0 6885 aaKnown RBP6.12□□□□□ -1.43
EXD3-212ENST00000491734 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
EXD3-212ENST00000491734 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
EXD3-212ENST00000491734 SPRR2FQ96RM1 72 aa6.04□□□□□ -1.44
EXD3-212ENST00000491734 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
EXD3-212ENST00000491734 KRTAP19-3Q7Z4W3 81 aa6.03□□□□□ -1.44
EXD3-212ENST00000491734 KRTAP4-3Q9BYR4 195 aa6.01□□□□□ -1.45
EXD3-212ENST00000491734 MT1GP13640 62 aa5.98□□□□□ -1.45
EXD3-212ENST00000491734 MT1MQ8N339 61 aa5.96□□□□□ -1.46
EXD3-212ENST00000491734 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
EXD3-212ENST00000491734 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
EXD3-212ENST00000491734 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
EXD3-212ENST00000491734 MDN1Q9NU22 5596 aa5.81□□□□□ -1.48
EXD3-212ENST00000491734 LCE1AQ5T7P2 110 aa5.8□□□□□ -1.48
EXD3-212ENST00000491734 SPRR2EP22531 72 aa5.76□□□□□ -1.49
EXD3-212ENST00000491734 SPRR2BP35325 72 aa5.76□□□□□ -1.49
EXD3-212ENST00000491734 SPRR2AP35326 72 aa5.76□□□□□ -1.49
EXD3-212ENST00000491734 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
EXD3-212ENST00000491734 NEBP20929 6669 aa5.65□□□□□ -1.5
EXD3-212ENST00000491734 SPRR2DP22532 72 aa5.56□□□□□ -1.52
EXD3-212ENST00000491734 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
EXD3-212ENST00000491734 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
EXD3-212ENST00000491734 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
EXD3-212ENST00000491734 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
EXD3-212ENST00000491734 MT1AP04731 61 aa5.32□□□□□ -1.56
EXD3-212ENST00000491734 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
EXD3-212ENST00000491734 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
EXD3-212ENST00000491734 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
EXD3-212ENST00000491734 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
EXD3-212ENST00000491734 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
EXD3-212ENST00000491734 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
EXD3-212ENST00000491734 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
EXD3-212ENST00000491734 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
EXD3-212ENST00000491734 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
EXD3-212ENST00000491734 PRM1P04553 51 aa4.94□□□□□ -1.62
EXD3-212ENST00000491734 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
EXD3-212ENST00000491734 MT4P47944 62 aa4.82□□□□□ -1.64
EXD3-212ENST00000491734 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
EXD3-212ENST00000491734 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
EXD3-212ENST00000491734 MT3P25713 68 aa4.76□□□□□ -1.65
EXD3-212ENST00000491734 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
EXD3-212ENST00000491734 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
EXD3-212ENST00000491734 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
EXD3-212ENST00000491734 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
EXD3-212ENST00000491734 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
EXD3-212ENST00000491734 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
EXD3-212ENST00000491734 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
EXD3-212ENST00000491734 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
EXD3-212ENST00000491734 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
EXD3-212ENST00000491734 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
EXD3-212ENST00000491734 MUC5ACP98088 5654 aa3.96□□□□□ -1.77
EXD3-212ENST00000491734 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
EXD3-212ENST00000491734 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
EXD3-212ENST00000491734 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
EXD3-212ENST00000491734 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
EXD3-212ENST00000491734 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
EXD3-212ENST00000491734 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
EXD3-212ENST00000491734 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
EXD3-212ENST00000491734 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
EXD3-212ENST00000491734 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
EXD3-212ENST00000491734 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
EXD3-212ENST00000491734 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
EXD3-212ENST00000491734 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
EXD3-212ENST00000491734 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
EXD3-212ENST00000491734 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
EXD3-212ENST00000491734 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
EXD3-212ENST00000491734 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
EXD3-212ENST00000491734 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
EXD3-212ENST00000491734 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
EXD3-212ENST00000491734 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 138.5 ms