RNA–Protein interactions for RNA: ENST00000491381.5

SNX21-212, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-212ENST00000491381 MT1GP13640 62 aa7.5□□□□□ -1.21
SNX21-212ENST00000491381 KRTAP6-3Q3LI67 103 aa7.49□□□□□ -1.21
SNX21-212ENST00000491381 MUC12Q9UKN1 5478 aa7.45□□□□□ -1.22
SNX21-212ENST00000491381 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
SNX21-212ENST00000491381 LCE5AQ5TCM9 118 aa7.42□□□□□ -1.22
SNX21-212ENST00000491381 MT1MQ8N339 61 aa7.38□□□□□ -1.23
SNX21-212ENST00000491381 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
SNX21-212ENST00000491381 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
SNX21-212ENST00000491381 LCE1AQ5T7P2 110 aa7.34□□□□□ -1.23
SNX21-212ENST00000491381 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
SNX21-212ENST00000491381 SPRR2EP22531 72 aa7.27□□□□□ -1.25
SNX21-212ENST00000491381 SPRR2BP35325 72 aa7.27□□□□□ -1.25
SNX21-212ENST00000491381 SPRR2AP35326 72 aa7.27□□□□□ -1.25
SNX21-212ENST00000491381 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
SNX21-212ENST00000491381 MDN1Q9NU22 5596 aa7.18□□□□□ -1.26
SNX21-212ENST00000491381 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
SNX21-212ENST00000491381 KRTAP9-6A8MVA2 160 aa7.16□□□□□ -1.26
SNX21-212ENST00000491381 SPRR2DP22532 72 aa7.01□□□□□ -1.29
SNX21-212ENST00000491381 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
SNX21-212ENST00000491381 NEBP20929 6669 aa6.83□□□□□ -1.32
SNX21-212ENST00000491381 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
SNX21-212ENST00000491381 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
SNX21-212ENST00000491381 KRTAP5-5Q701N2 237 aaPredicted RBP6.68□□□□□ -1.34
SNX21-212ENST00000491381 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
SNX21-212ENST00000491381 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
SNX21-212ENST00000491381 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
SNX21-212ENST00000491381 H3BS24 57 aa6.61□□□□□ -1.35
SNX21-212ENST00000491381 MT1AP04731 61 aa6.56□□□□□ -1.36
SNX21-212ENST00000491381 KRTAP6-1Q3LI64 71 aa6.46□□□□□ -1.38
SNX21-212ENST00000491381 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
SNX21-212ENST00000491381 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
SNX21-212ENST00000491381 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
SNX21-212ENST00000491381 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
SNX21-212ENST00000491381 LCE4AQ5TA78 99 aa6.28□□□□□ -1.4
SNX21-212ENST00000491381 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
SNX21-212ENST00000491381 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
SNX21-212ENST00000491381 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
SNX21-212ENST00000491381 MT4P47944 62 aa6.04□□□□□ -1.44
SNX21-212ENST00000491381 INE1O15225 51 aa6.03□□□□□ -1.44
SNX21-212ENST00000491381 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
SNX21-212ENST00000491381 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
SNX21-212ENST00000491381 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.45
SNX21-212ENST00000491381 MT3P25713 68 aa5.95□□□□□ -1.46
SNX21-212ENST00000491381 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
SNX21-212ENST00000491381 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
SNX21-212ENST00000491381 HMCN1Q96RW7 5635 aa5.81□□□□□ -1.48
SNX21-212ENST00000491381 KRTAP5-2Q701N4 177 aa5.81□□□□□ -1.48
SNX21-212ENST00000491381 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
SNX21-212ENST00000491381 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
SNX21-212ENST00000491381 LCE3EQ5T5B0 92 aa5.56□□□□□ -1.52
SNX21-212ENST00000491381 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
SNX21-212ENST00000491381 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
SNX21-212ENST00000491381 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
SNX21-212ENST00000491381 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
SNX21-212ENST00000491381 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
SNX21-212ENST00000491381 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
SNX21-212ENST00000491381 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
SNX21-212ENST00000491381 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
SNX21-212ENST00000491381 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
SNX21-212ENST00000491381 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
SNX21-212ENST00000491381 PRM1P04553 51 aa4.82□□□□□ -1.64
SNX21-212ENST00000491381 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
SNX21-212ENST00000491381 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
SNX21-212ENST00000491381 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
SNX21-212ENST00000491381 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
SNX21-212ENST00000491381 KRTAP9-9Q9BYP9 154 aa4.47□□□□□ -1.69
SNX21-212ENST00000491381 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
SNX21-212ENST00000491381 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
SNX21-212ENST00000491381 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
SNX21-212ENST00000491381 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
SNX21-212ENST00000491381 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
SNX21-212ENST00000491381 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
SNX21-212ENST00000491381 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SNX21-212ENST00000491381 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
SNX21-212ENST00000491381 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
SNX21-212ENST00000491381 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
SNX21-212ENST00000491381 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 64.1 ms