RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 ROMO1P60602 79 aa6.84□□□□□ -1.31
PRDM2-209ENST00000491134 MDN1Q9NU22 5596 aa6.82□□□□□ -1.32
PRDM2-209ENST00000491134 KRTAP19-5Q3LI72 72 aa6.77□□□□□ -1.33
PRDM2-209ENST00000491134 MT1EP04732 61 aa6.74□□□□□ -1.33
PRDM2-209ENST00000491134 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
PRDM2-209ENST00000491134 NEBP20929 6669 aa6.74□□□□□ -1.33
PRDM2-209ENST00000491134 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
PRDM2-209ENST00000491134 SPRR2EP22531 72 aa6.68□□□□□ -1.34
PRDM2-209ENST00000491134 SPRR2BP35325 72 aa6.68□□□□□ -1.34
PRDM2-209ENST00000491134 SPRR2AP35326 72 aa6.68□□□□□ -1.34
PRDM2-209ENST00000491134 KRTAP4-2Q9BYR5 136 aa6.64□□□□□ -1.35
PRDM2-209ENST00000491134 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
PRDM2-209ENST00000491134 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
PRDM2-209ENST00000491134 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
PRDM2-209ENST00000491134 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
PRDM2-209ENST00000491134 MT1LQ93083 61 aa6.53□□□□□ -1.36
PRDM2-209ENST00000491134 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
PRDM2-209ENST00000491134 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
PRDM2-209ENST00000491134 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
PRDM2-209ENST00000491134 MT1GP13640 62 aa6.46□□□□□ -1.38
PRDM2-209ENST00000491134 SPRR2DP22532 72 aa6.45□□□□□ -1.38
PRDM2-209ENST00000491134 MT1MQ8N339 61 aa6.38□□□□□ -1.39
PRDM2-209ENST00000491134 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
PRDM2-209ENST00000491134 KRTAP20-1Q3LI63 56 aa6.34□□□□□ -1.39
PRDM2-209ENST00000491134 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
PRDM2-209ENST00000491134 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
PRDM2-209ENST00000491134 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
PRDM2-209ENST00000491134 PRAC1Q96KF2 57 aa6.19□□□□□ -1.42
PRDM2-209ENST00000491134 KRTAP2-2Q9BYT5 123 aa6.16□□□□□ -1.42
PRDM2-209ENST00000491134 KRTAP2-1Q9BYU5 128 aa6.16□□□□□ -1.42
PRDM2-209ENST00000491134 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
PRDM2-209ENST00000491134 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PRDM2-209ENST00000491134 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
PRDM2-209ENST00000491134 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
PRDM2-209ENST00000491134 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
PRDM2-209ENST00000491134 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
PRDM2-209ENST00000491134 KRTAP5-3Q6L8H2 238 aa5.82□□□□□ -1.48
PRDM2-209ENST00000491134 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
PRDM2-209ENST00000491134 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
PRDM2-209ENST00000491134 MT4P47944 62 aa5.59□□□□□ -1.51
PRDM2-209ENST00000491134 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.52
PRDM2-209ENST00000491134 MT1AP04731 61 aa5.56□□□□□ -1.52
PRDM2-209ENST00000491134 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
PRDM2-209ENST00000491134 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
PRDM2-209ENST00000491134 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
PRDM2-209ENST00000491134 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
PRDM2-209ENST00000491134 KRTAP5-2Q701N4 177 aa5.2□□□□□ -1.58
PRDM2-209ENST00000491134 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
PRDM2-209ENST00000491134 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
PRDM2-209ENST00000491134 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
PRDM2-209ENST00000491134 MT3P25713 68 aa5.03□□□□□ -1.6
PRDM2-209ENST00000491134 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
PRDM2-209ENST00000491134 GPR98Q8WXG9 6306 aa5□□□□□ -1.61
PRDM2-209ENST00000491134 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
PRDM2-209ENST00000491134 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
PRDM2-209ENST00000491134 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
PRDM2-209ENST00000491134 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
PRDM2-209ENST00000491134 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
PRDM2-209ENST00000491134 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
PRDM2-209ENST00000491134 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
PRDM2-209ENST00000491134 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
PRDM2-209ENST00000491134 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
PRDM2-209ENST00000491134 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
PRDM2-209ENST00000491134 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
PRDM2-209ENST00000491134 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
PRDM2-209ENST00000491134 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
PRDM2-209ENST00000491134 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
PRDM2-209ENST00000491134 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
PRDM2-209ENST00000491134 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
PRDM2-209ENST00000491134 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
PRDM2-209ENST00000491134 INE1O15225 51 aa3.79□□□□□ -1.8
PRDM2-209ENST00000491134 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
PRDM2-209ENST00000491134 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
PRDM2-209ENST00000491134 PRM1P04553 51 aa3.53□□□□□ -1.84
PRDM2-209ENST00000491134 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
PRDM2-209ENST00000491134 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
PRDM2-209ENST00000491134 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PRDM2-209ENST00000491134 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 505.4 ms