RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SPRR2AP35326 72 aa2.42□□□□□ -2.02
NPHP3-208ENST00000490993 KRTAP4-7Q9BYR0 210 aa2.41□□□□□ -2.02
NPHP3-208ENST00000490993 MT1MQ8N339 61 aa2.4□□□□□ -2.02
NPHP3-208ENST00000490993 KRTAP9-2Q9BYQ4 174 aa2.38□□□□□ -2.03
NPHP3-208ENST00000490993 SPRR2DP22532 72 aa2.34□□□□□ -2.03
NPHP3-208ENST00000490993 USH2AO75445 5202 aa2.34□□□□□ -2.04
NPHP3-208ENST00000490993 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
NPHP3-208ENST00000490993 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
NPHP3-208ENST00000490993 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
NPHP3-208ENST00000490993 LCE3BQ5TA77 95 aa2.29□□□□□ -2.04
NPHP3-208ENST00000490993 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
NPHP3-208ENST00000490993 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.05
NPHP3-208ENST00000490993 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
NPHP3-208ENST00000490993 LCE5AQ5TCM9 118 aa2.27□□□□□ -2.05
NPHP3-208ENST00000490993 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
NPHP3-208ENST00000490993 LCE1AQ5T7P2 110 aa2.24□□□□□ -2.05
NPHP3-208ENST00000490993 MT1AP04731 61 aa2.21□□□□□ -2.06
NPHP3-208ENST00000490993 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
NPHP3-208ENST00000490993 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
NPHP3-208ENST00000490993 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
NPHP3-208ENST00000490993 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
NPHP3-208ENST00000490993 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
NPHP3-208ENST00000490993 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
NPHP3-208ENST00000490993 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
NPHP3-208ENST00000490993 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
NPHP3-208ENST00000490993 KMT2DO14686 5537 aa2.12□□□□□ -2.07
NPHP3-208ENST00000490993 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.12□□□□□ -2.07
NPHP3-208ENST00000490993 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
NPHP3-208ENST00000490993 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
NPHP3-208ENST00000490993 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
NPHP3-208ENST00000490993 KRTAP9-7A8MTY7 169 aa2.03□□□□□ -2.08
NPHP3-208ENST00000490993 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.09
NPHP3-208ENST00000490993 KRTAP4-6Q9BYQ5 205 aa2.03□□□□□ -2.09
NPHP3-208ENST00000490993 SYNE2Q8WXH0 6885 aaKnown RBP2.02□□□□□ -2.09
NPHP3-208ENST00000490993 KRTAP4-9Q9BYQ8 210 aa2.01□□□□□ -2.09
NPHP3-208ENST00000490993 LCE4AQ5TA78 99 aa2□□□□□ -2.09
NPHP3-208ENST00000490993 MT4P47944 62 aa2□□□□□ -2.09
NPHP3-208ENST00000490993 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
NPHP3-208ENST00000490993 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
NPHP3-208ENST00000490993 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
NPHP3-208ENST00000490993 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.09
NPHP3-208ENST00000490993 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
NPHP3-208ENST00000490993 PRM1P04553 51 aa1.95□□□□□ -2.1
NPHP3-208ENST00000490993 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
NPHP3-208ENST00000490993 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
NPHP3-208ENST00000490993 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
NPHP3-208ENST00000490993 NEBP20929 6669 aa1.88□□□□□ -2.11
NPHP3-208ENST00000490993 LCE1DQ5T752 114 aa1.86□□□□□ -2.11
NPHP3-208ENST00000490993 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
NPHP3-208ENST00000490993 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
NPHP3-208ENST00000490993 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
NPHP3-208ENST00000490993 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
NPHP3-208ENST00000490993 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
NPHP3-208ENST00000490993 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
NPHP3-208ENST00000490993 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
NPHP3-208ENST00000490993 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
NPHP3-208ENST00000490993 LCE1CQ5T751 118 aa1.65□□□□□ -2.14
NPHP3-208ENST00000490993 KRTAP9-9Q9BYP9 154 aa1.63□□□□□ -2.15
NPHP3-208ENST00000490993 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
NPHP3-208ENST00000490993 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
NPHP3-208ENST00000490993 KRTAP4-11Q9BYQ6 195 aa1.54□□□□□ -2.16
NPHP3-208ENST00000490993 KRTAP4-12Q9BQ66 201 aa1.51□□□□□ -2.17
NPHP3-208ENST00000490993 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
NPHP3-208ENST00000490993 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
NPHP3-208ENST00000490993 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
NPHP3-208ENST00000490993 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
NPHP3-208ENST00000490993 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
NPHP3-208ENST00000490993 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
NPHP3-208ENST00000490993 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
NPHP3-208ENST00000490993 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
NPHP3-208ENST00000490993 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
NPHP3-208ENST00000490993 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
NPHP3-208ENST00000490993 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
NPHP3-208ENST00000490993 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
NPHP3-208ENST00000490993 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
NPHP3-208ENST00000490993 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
NPHP3-208ENST00000490993 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
NPHP3-208ENST00000490993 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 123.7 ms