RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
SNX12-205ENST00000490561 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
SNX12-205ENST00000490561 MT1EP04732 61 aa4.87□□□□□ -1.63
SNX12-205ENST00000490561 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
SNX12-205ENST00000490561 SPRR2EP22531 72 aa4.78□□□□□ -1.64
SNX12-205ENST00000490561 SPRR2BP35325 72 aa4.78□□□□□ -1.64
SNX12-205ENST00000490561 SPRR2AP35326 72 aa4.78□□□□□ -1.64
SNX12-205ENST00000490561 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
SNX12-205ENST00000490561 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
SNX12-205ENST00000490561 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
SNX12-205ENST00000490561 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
SNX12-205ENST00000490561 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
SNX12-205ENST00000490561 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
SNX12-205ENST00000490561 MT1LQ93083 61 aa4.73□□□□□ -1.65
SNX12-205ENST00000490561 MT1GP13640 62 aa4.71□□□□□ -1.66
SNX12-205ENST00000490561 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
SNX12-205ENST00000490561 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
SNX12-205ENST00000490561 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
SNX12-205ENST00000490561 SPRR2DP22532 72 aa4.63□□□□□ -1.67
SNX12-205ENST00000490561 MT1MQ8N339 61 aa4.6□□□□□ -1.67
SNX12-205ENST00000490561 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
SNX12-205ENST00000490561 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
SNX12-205ENST00000490561 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
SNX12-205ENST00000490561 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
SNX12-205ENST00000490561 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
SNX12-205ENST00000490561 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
SNX12-205ENST00000490561 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
SNX12-205ENST00000490561 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
SNX12-205ENST00000490561 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
SNX12-205ENST00000490561 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SNX12-205ENST00000490561 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
SNX12-205ENST00000490561 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
SNX12-205ENST00000490561 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SNX12-205ENST00000490561 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
SNX12-205ENST00000490561 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SNX12-205ENST00000490561 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SNX12-205ENST00000490561 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
SNX12-205ENST00000490561 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
SNX12-205ENST00000490561 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
SNX12-205ENST00000490561 MT1AP04731 61 aa4.06□□□□□ -1.76
SNX12-205ENST00000490561 KRTAP12-4P60329 112 aa4□□□□□ -1.77
SNX12-205ENST00000490561 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SNX12-205ENST00000490561 MT4P47944 62 aa3.97□□□□□ -1.77
SNX12-205ENST00000490561 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
SNX12-205ENST00000490561 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
SNX12-205ENST00000490561 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
SNX12-205ENST00000490561 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
SNX12-205ENST00000490561 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
SNX12-205ENST00000490561 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
SNX12-205ENST00000490561 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
SNX12-205ENST00000490561 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
SNX12-205ENST00000490561 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
SNX12-205ENST00000490561 MT3P25713 68 aa3.71□□□□□ -1.82
SNX12-205ENST00000490561 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
SNX12-205ENST00000490561 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
SNX12-205ENST00000490561 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
SNX12-205ENST00000490561 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SNX12-205ENST00000490561 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SNX12-205ENST00000490561 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
SNX12-205ENST00000490561 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
SNX12-205ENST00000490561 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
SNX12-205ENST00000490561 INE1O15225 51 aa3.23□□□□□ -1.89
SNX12-205ENST00000490561 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
SNX12-205ENST00000490561 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SNX12-205ENST00000490561 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
SNX12-205ENST00000490561 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
SNX12-205ENST00000490561 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SNX12-205ENST00000490561 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
SNX12-205ENST00000490561 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
SNX12-205ENST00000490561 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
SNX12-205ENST00000490561 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
SNX12-205ENST00000490561 PRM1P04553 51 aa2.69□□□□□ -1.98
SNX12-205ENST00000490561 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SNX12-205ENST00000490561 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SNX12-205ENST00000490561 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
SNX12-205ENST00000490561 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
SNX12-205ENST00000490561 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SNX12-205ENST00000490561 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 87.5 ms