RNA–Protein interactions for RNA: ENST00000490478.5

CACNA2D3-210, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-210ENST00000490478 MT2AP02795 61 aa2.31□□□□□ -2.04
CACNA2D3-210ENST00000490478 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
CACNA2D3-210ENST00000490478 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
CACNA2D3-210ENST00000490478 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
CACNA2D3-210ENST00000490478 MT3P25713 68 aa2.28□□□□□ -2.04
CACNA2D3-210ENST00000490478 KRTAP4-8Q9BYQ9 185 aa2.28□□□□□ -2.04
CACNA2D3-210ENST00000490478 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
CACNA2D3-210ENST00000490478 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
CACNA2D3-210ENST00000490478 LCE3BQ5TA77 95 aa2.26□□□□□ -2.05
CACNA2D3-210ENST00000490478 KRTAP9-8Q9BYQ0 159 aa2.26□□□□□ -2.05
CACNA2D3-210ENST00000490478 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
CACNA2D3-210ENST00000490478 MT1HP80294 61 aa2.23□□□□□ -2.05
CACNA2D3-210ENST00000490478 KRTAP4-8A0A0G2JLE6 195 aa2.23□□□□□ -2.05
CACNA2D3-210ENST00000490478 LCE1DQ5T752 114 aa2.21□□□□□ -2.05
CACNA2D3-210ENST00000490478 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
CACNA2D3-210ENST00000490478 PRM1P04553 51 aa2.14□□□□□ -2.07
CACNA2D3-210ENST00000490478 USH2AO75445 5202 aa2.14□□□□□ -2.07
CACNA2D3-210ENST00000490478 MT1LQ93083 61 aa2.14□□□□□ -2.07
CACNA2D3-210ENST00000490478 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
CACNA2D3-210ENST00000490478 KRTAP4-9Q9BYQ8 210 aa2.11□□□□□ -2.07
CACNA2D3-210ENST00000490478 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
CACNA2D3-210ENST00000490478 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
CACNA2D3-210ENST00000490478 KRTAP4-3Q9BYR4 195 aa2.08□□□□□ -2.08
CACNA2D3-210ENST00000490478 MT1GP13640 62 aa2.07□□□□□ -2.08
CACNA2D3-210ENST00000490478 MT1EP04732 61 aa2.06□□□□□ -2.08
CACNA2D3-210ENST00000490478 CRCT1Q9UGL9 99 aa2.05□□□□□ -2.08
CACNA2D3-210ENST00000490478 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
CACNA2D3-210ENST00000490478 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
CACNA2D3-210ENST00000490478 MT1AP04731 61 aa1.98□□□□□ -2.09
CACNA2D3-210ENST00000490478 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
CACNA2D3-210ENST00000490478 KRTAP4-11Q9BYQ6 195 aa1.97□□□□□ -2.09
CACNA2D3-210ENST00000490478 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
CACNA2D3-210ENST00000490478 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
CACNA2D3-210ENST00000490478 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
CACNA2D3-210ENST00000490478 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
CACNA2D3-210ENST00000490478 MT1MQ8N339 61 aa1.9□□□□□ -2.1
CACNA2D3-210ENST00000490478 FSIP2Q5CZC0 6907 aa1.88□□□□□ -2.11
CACNA2D3-210ENST00000490478 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
CACNA2D3-210ENST00000490478 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
CACNA2D3-210ENST00000490478 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
CACNA2D3-210ENST00000490478 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
CACNA2D3-210ENST00000490478 NEBP20929 6669 aa1.81□□□□□ -2.12
CACNA2D3-210ENST00000490478 SPRR2FQ96RM1 72 aa1.8□□□□□ -2.12
CACNA2D3-210ENST00000490478 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
CACNA2D3-210ENST00000490478 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
CACNA2D3-210ENST00000490478 KRTAP19-6Q3LI70 58 aa1.69□□□□□ -2.14
CACNA2D3-210ENST00000490478 KRTAP20-1Q3LI63 56 aa1.68□□□□□ -2.14
CACNA2D3-210ENST00000490478 KRTAP5-3Q6L8H2 238 aa1.68□□□□□ -2.14
CACNA2D3-210ENST00000490478 SPRR2AP35326 72 aa1.63□□□□□ -2.15
CACNA2D3-210ENST00000490478 SPRR2EP22531 72 aa1.63□□□□□ -2.15
CACNA2D3-210ENST00000490478 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
CACNA2D3-210ENST00000490478 SPRR2DP22532 72 aa1.6□□□□□ -2.15
CACNA2D3-210ENST00000490478 KRTAP5-9P26371 169 aa1.6□□□□□ -2.15
CACNA2D3-210ENST00000490478 SPRR2BP35325 72 aa1.56□□□□□ -2.16
CACNA2D3-210ENST00000490478 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
CACNA2D3-210ENST00000490478 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
CACNA2D3-210ENST00000490478 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
CACNA2D3-210ENST00000490478 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
CACNA2D3-210ENST00000490478 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
CACNA2D3-210ENST00000490478 MUC5ACP98088 5654 aa1.47□□□□□ -2.17
CACNA2D3-210ENST00000490478 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
CACNA2D3-210ENST00000490478 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
CACNA2D3-210ENST00000490478 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
CACNA2D3-210ENST00000490478 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
CACNA2D3-210ENST00000490478 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
CACNA2D3-210ENST00000490478 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
CACNA2D3-210ENST00000490478 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
CACNA2D3-210ENST00000490478 KRTAP5-2Q701N4 177 aa1.32□□□□□ -2.2
CACNA2D3-210ENST00000490478 KRTAP5-1Q6L8H4 278 aa1.31□□□□□ -2.2
CACNA2D3-210ENST00000490478 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
CACNA2D3-210ENST00000490478 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
CACNA2D3-210ENST00000490478 MT4P47944 62 aa1.13□□□□□ -2.23
CACNA2D3-210ENST00000490478 KRTAP20-2Q3LI61 65 aa1.13□□□□□ -2.23
CACNA2D3-210ENST00000490478 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.12□□□□□ -2.23
CACNA2D3-210ENST00000490478 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
CACNA2D3-210ENST00000490478 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
CACNA2D3-210ENST00000490478 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 13.6 ms