RNA–Protein interactions for RNA: ENST00000490210.6

ATP9B-204, Transcript of ATPase phospholipid transporting 9B (putative), humanhuman

TSL 1 (best)

Gene ATP9B, Length 7,353 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9B-204ENST00000490210 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
ATP9B-204ENST00000490210 MT1EP04732 61 aa3.22□□□□□ -1.89
ATP9B-204ENST00000490210 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
ATP9B-204ENST00000490210 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.89
ATP9B-204ENST00000490210 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.89
ATP9B-204ENST00000490210 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.89
ATP9B-204ENST00000490210 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
ATP9B-204ENST00000490210 MT4P47944 62 aa3.18□□□□□ -1.9
ATP9B-204ENST00000490210 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
ATP9B-204ENST00000490210 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.9
ATP9B-204ENST00000490210 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
ATP9B-204ENST00000490210 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
ATP9B-204ENST00000490210 LPAP08519 4548 aa3.13□□□□□ -1.91
ATP9B-204ENST00000490210 MT1MQ8N339 61 aa3.09□□□□□ -1.91
ATP9B-204ENST00000490210 MT3P25713 68 aa3.09□□□□□ -1.91
ATP9B-204ENST00000490210 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
ATP9B-204ENST00000490210 TNXBP22105 4242 aa3.06□□□□□ -1.92
ATP9B-204ENST00000490210 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
ATP9B-204ENST00000490210 LOC100996750A0A140TA64 210 aa3.03□□□□□ -1.92
ATP9B-204ENST00000490210 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
ATP9B-204ENST00000490210 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
ATP9B-204ENST00000490210 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
ATP9B-204ENST00000490210 MT1AP04731 61 aa2.96□□□□□ -1.94
ATP9B-204ENST00000490210 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
ATP9B-204ENST00000490210 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
ATP9B-204ENST00000490210 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
ATP9B-204ENST00000490210 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
ATP9B-204ENST00000490210 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
ATP9B-204ENST00000490210 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
ATP9B-204ENST00000490210 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
ATP9B-204ENST00000490210 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
ATP9B-204ENST00000490210 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
ATP9B-204ENST00000490210 NEBP20929 6669 aa2.81□□□□□ -1.96
ATP9B-204ENST00000490210 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
ATP9B-204ENST00000490210 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
ATP9B-204ENST00000490210 LCE5AQ5TCM9 118 aa2.72□□□□□ -1.97
ATP9B-204ENST00000490210 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
ATP9B-204ENST00000490210 USH2AO75445 5202 aa2.7□□□□□ -1.98
ATP9B-204ENST00000490210 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
ATP9B-204ENST00000490210 MUC2Q02817 5179 aa2.65□□□□□ -1.99
ATP9B-204ENST00000490210 KRTAP5-9P26371 169 aa2.57□□□□□ -2
ATP9B-204ENST00000490210 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
ATP9B-204ENST00000490210 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
ATP9B-204ENST00000490210 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
ATP9B-204ENST00000490210 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
ATP9B-204ENST00000490210 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
ATP9B-204ENST00000490210 KMT2DO14686 5537 aa2.42□□□□□ -2.02
ATP9B-204ENST00000490210 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
ATP9B-204ENST00000490210 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
ATP9B-204ENST00000490210 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
ATP9B-204ENST00000490210 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
ATP9B-204ENST00000490210 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
ATP9B-204ENST00000490210 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
ATP9B-204ENST00000490210 KRTAP4-6Q9BYQ5 205 aa2.33□□□□□ -2.04
ATP9B-204ENST00000490210 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
ATP9B-204ENST00000490210 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
ATP9B-204ENST00000490210 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
ATP9B-204ENST00000490210 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
ATP9B-204ENST00000490210 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
ATP9B-204ENST00000490210 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
ATP9B-204ENST00000490210 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
ATP9B-204ENST00000490210 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
ATP9B-204ENST00000490210 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
ATP9B-204ENST00000490210 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
ATP9B-204ENST00000490210 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
ATP9B-204ENST00000490210 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
ATP9B-204ENST00000490210 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
ATP9B-204ENST00000490210 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
ATP9B-204ENST00000490210 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
ATP9B-204ENST00000490210 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
ATP9B-204ENST00000490210 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
ATP9B-204ENST00000490210 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
ATP9B-204ENST00000490210 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
ATP9B-204ENST00000490210 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
ATP9B-204ENST00000490210 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
ATP9B-204ENST00000490210 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
ATP9B-204ENST00000490210 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
ATP9B-204ENST00000490210 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 28.4 ms