RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
UBXN4-208ENST00000490163 MYCBP2O75592 4640 aa1.2□□□□□ -2.22
UBXN4-208ENST00000490163 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
UBXN4-208ENST00000490163 M0QZ58 72 aa1.2□□□□□ -2.22
UBXN4-208ENST00000490163 KRTAP12-4P60329 112 aa1.19□□□□□ -2.22
UBXN4-208ENST00000490163 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
UBXN4-208ENST00000490163 SSPOA2VEC9 5147 aa1.18□□□□□ -2.22
UBXN4-208ENST00000490163 RPS29P62273 56 aaKnown RBP1.17□□□□□ -2.22
UBXN4-208ENST00000490163 LRP1Q07954 4544 aaKnown RBP1.17□□□□□ -2.22
UBXN4-208ENST00000490163 MT1HL1P0DM35 61 aa1.17□□□□□ -2.22
UBXN4-208ENST00000490163 LCE3AQ5TA76 89 aa1.17□□□□□ -2.22
UBXN4-208ENST00000490163 HERC1Q15751 4861 aa1.16□□□□□ -2.22
UBXN4-208ENST00000490163 FLGP20930 4061 aaPredicted RBP1.14□□□□□ -2.23
UBXN4-208ENST00000490163 KIAA1109Q2LD37 5005 aa1.14□□□□□ -2.23
UBXN4-208ENST00000490163 Q5VSD8 79 aa1.12□□□□□ -2.23
UBXN4-208ENST00000490163 HMCN2Q8NDA2 5059 aa1.11□□□□□ -2.23
UBXN4-208ENST00000490163 KRTAP19-2Q3LHN2 52 aa1.11□□□□□ -2.23
UBXN4-208ENST00000490163 LRP2P98164 4655 aa1.1□□□□□ -2.23
UBXN4-208ENST00000490163 TNP1P09430 55 aa1.1□□□□□ -2.23
UBXN4-208ENST00000490163 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
UBXN4-208ENST00000490163 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
UBXN4-208ENST00000490163 SMR3BP02814 79 aaPredicted RBP1.05□□□□□ -2.24
UBXN4-208ENST00000490163 LPAP08519 4548 aa1.05□□□□□ -2.24
UBXN4-208ENST00000490163 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
UBXN4-208ENST00000490163 KRTAP4-1Q9BYQ7 146 aa1.04□□□□□ -2.24
UBXN4-208ENST00000490163 LCE1CQ5T751 118 aa1.04□□□□□ -2.24
UBXN4-208ENST00000490163 LCE1BQ5T7P3 118 aa1.04□□□□□ -2.24
UBXN4-208ENST00000490163 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
UBXN4-208ENST00000490163 RNF213Q63HN8 5207 aa1□□□□□ -2.25
UBXN4-208ENST00000490163 MUC2Q02817 5179 aa0.99□□□□□ -2.25
UBXN4-208ENST00000490163 MT1HP80294 61 aa0.98□□□□□ -2.25
UBXN4-208ENST00000490163 FAT4Q6V0I7 4981 aa0.97□□□□□ -2.25
UBXN4-208ENST00000490163 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
UBXN4-208ENST00000490163 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
UBXN4-208ENST00000490163 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
UBXN4-208ENST00000490163 KMT2DO14686 5537 aa0.94□□□□□ -2.26
UBXN4-208ENST00000490163 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
UBXN4-208ENST00000490163 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
UBXN4-208ENST00000490163 MT2AP02795 61 aa0.93□□□□□ -2.26
UBXN4-208ENST00000490163 KRTAP12-3P60328 96 aa0.93□□□□□ -2.26
UBXN4-208ENST00000490163 SPRR2GQ9BYE4 73 aa0.92□□□□□ -2.26
UBXN4-208ENST00000490163 MT1FP04733 61 aa0.92□□□□□ -2.26
UBXN4-208ENST00000490163 M0R2T5 61 aa0.91□□□□□ -2.26
UBXN4-208ENST00000490163 MT1BP07438 61 aa0.89□□□□□ -2.27
UBXN4-208ENST00000490163 USH2AO75445 5202 aa0.88□□□□□ -2.27
UBXN4-208ENST00000490163 KRTAP19-6Q3LI70 58 aa0.88□□□□□ -2.27
UBXN4-208ENST00000490163 MDN1Q9NU22 5596 aa0.88□□□□□ -2.27
UBXN4-208ENST00000490163 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
UBXN4-208ENST00000490163 MT1XP80297 61 aa0.85□□□□□ -2.27
UBXN4-208ENST00000490163 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
UBXN4-208ENST00000490163 SYNE2Q8WXH0 6885 aaKnown RBP0.81□□□□□ -2.28
UBXN4-208ENST00000490163 PRM1P04553 51 aa0.76□□□□□ -2.29
UBXN4-208ENST00000490163 KRTAP19-7Q3SYF9 63 aa0.76□□□□□ -2.29
UBXN4-208ENST00000490163 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
UBXN4-208ENST00000490163 FCGBPQ9Y6R7 5405 aaPredicted RBP0.75□□□□□ -2.29
UBXN4-208ENST00000490163 MT1EP04732 61 aa0.74□□□□□ -2.29
UBXN4-208ENST00000490163 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
UBXN4-208ENST00000490163 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
UBXN4-208ENST00000490163 MT1LQ93083 61 aa0.72□□□□□ -2.29
UBXN4-208ENST00000490163 MACF1Q9UPN3 7388 aaKnown RBP0.72□□□□□ -2.29
UBXN4-208ENST00000490163 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
UBXN4-208ENST00000490163 MT1MQ8N339 61 aa0.7□□□□□ -2.3
UBXN4-208ENST00000490163 MT1AP04731 61 aa0.69□□□□□ -2.3
UBXN4-208ENST00000490163 MT1GP13640 62 aa0.69□□□□□ -2.3
UBXN4-208ENST00000490163 MUC12Q9UKN1 5478 aa0.67□□□□□ -2.3
UBXN4-208ENST00000490163 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
UBXN4-208ENST00000490163 FSIP2Q5CZC0 6907 aa0.67□□□□□ -2.3
UBXN4-208ENST00000490163 SPRR2EP22531 72 aa0.65□□□□□ -2.31
UBXN4-208ENST00000490163 SPRR2BP35325 72 aa0.65□□□□□ -2.31
UBXN4-208ENST00000490163 SPRR2AP35326 72 aa0.65□□□□□ -2.31
UBXN4-208ENST00000490163 SPRR2FQ96RM1 72 aa0.65□□□□□ -2.31
UBXN4-208ENST00000490163 SPRR2DP22532 72 aa0.63□□□□□ -2.31
UBXN4-208ENST00000490163 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
UBXN4-208ENST00000490163 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
UBXN4-208ENST00000490163 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
UBXN4-208ENST00000490163 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.32
UBXN4-208ENST00000490163 MT4P47944 62 aa0.49□□□□□ -2.33
UBXN4-208ENST00000490163 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms