RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 COA5Q86WW8 74 aa3.18□□□□□ -1.9
HUWE1-213ENST00000489876 SPTSSBQ8NFR3 76 aa3.18□□□□□ -1.9
HUWE1-213ENST00000489876 A8MU10 97 aa3.16□□□□□ -1.9
HUWE1-213ENST00000489876 SPRR2DP22532 72 aa3.15□□□□□ -1.91
HUWE1-213ENST00000489876 SPATA8Q6RVD6 105 aa3.13□□□□□ -1.91
HUWE1-213ENST00000489876 A0A0D9SG42 100 aa3.12□□□□□ -1.91
HUWE1-213ENST00000489876 COX7CP15954 63 aa3.12□□□□□ -1.91
HUWE1-213ENST00000489876 H7BZZ5 65 aa3.11□□□□□ -1.91
HUWE1-213ENST00000489876 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
HUWE1-213ENST00000489876 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
HUWE1-213ENST00000489876 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
HUWE1-213ENST00000489876 KRTAP12-1P59990 96 aa3.06□□□□□ -1.92
HUWE1-213ENST00000489876 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
HUWE1-213ENST00000489876 A0A1B0GU33 70 aa3.03□□□□□ -1.92
HUWE1-213ENST00000489876 CCDC179H3BU77 68 aa3.03□□□□□ -1.92
HUWE1-213ENST00000489876 MT1EP04732 61 aa3.03□□□□□ -1.92
HUWE1-213ENST00000489876 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
HUWE1-213ENST00000489876 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
HUWE1-213ENST00000489876 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
HUWE1-213ENST00000489876 ANAPC13Q9BS18 74 aa3.01□□□□□ -1.93
HUWE1-213ENST00000489876 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
HUWE1-213ENST00000489876 SEC61GP60059 68 aa2.99□□□□□ -1.93
HUWE1-213ENST00000489876 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
HUWE1-213ENST00000489876 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
HUWE1-213ENST00000489876 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
HUWE1-213ENST00000489876 A0A1B0GU69 56 aa2.95□□□□□ -1.94
HUWE1-213ENST00000489876 MT1MQ8N339 61 aa2.9□□□□□ -1.95
HUWE1-213ENST00000489876 MT1LQ93083 61 aa2.9□□□□□ -1.95
HUWE1-213ENST00000489876 SMIM26A0A096LP01 95 aa2.89□□□□□ -1.95
HUWE1-213ENST00000489876 MT1GP13640 62 aa2.87□□□□□ -1.95
HUWE1-213ENST00000489876 TMEM258P61165 79 aa2.86□□□□□ -1.95
HUWE1-213ENST00000489876 LINC01558Q9Y6Z2 57 aa2.86□□□□□ -1.95
HUWE1-213ENST00000489876 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
HUWE1-213ENST00000489876 TNP1P09430 55 aa2.82□□□□□ -1.96
HUWE1-213ENST00000489876 ATP5EP56381 51 aaPredicted RBP2.82□□□□□ -1.96
HUWE1-213ENST00000489876 MT4P47944 62 aa2.79□□□□□ -1.96
HUWE1-213ENST00000489876 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
HUWE1-213ENST00000489876 PRR15LQ9BU68 103 aa2.79□□□□□ -1.96
HUWE1-213ENST00000489876 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
HUWE1-213ENST00000489876 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
HUWE1-213ENST00000489876 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
HUWE1-213ENST00000489876 UQCR11O14957 56 aa2.73□□□□□ -1.97
HUWE1-213ENST00000489876 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
HUWE1-213ENST00000489876 PSPHP1O15172 72 aa2.72□□□□□ -1.97
HUWE1-213ENST00000489876 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
HUWE1-213ENST00000489876 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
HUWE1-213ENST00000489876 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
HUWE1-213ENST00000489876 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
HUWE1-213ENST00000489876 V9GYY9 64 aa2.65□□□□□ -1.99
HUWE1-213ENST00000489876 Q1T7F1 81 aa2.64□□□□□ -1.99
HUWE1-213ENST00000489876 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
HUWE1-213ENST00000489876 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
HUWE1-213ENST00000489876 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
HUWE1-213ENST00000489876 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
HUWE1-213ENST00000489876 A6NED7 52 aa2.56□□□□□ -2
HUWE1-213ENST00000489876 K7ERS5 55 aa2.55□□□□□ -2
HUWE1-213ENST00000489876 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
HUWE1-213ENST00000489876 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
HUWE1-213ENST00000489876 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
HUWE1-213ENST00000489876 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
HUWE1-213ENST00000489876 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
HUWE1-213ENST00000489876 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
HUWE1-213ENST00000489876 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
HUWE1-213ENST00000489876 ROMO1P60602 79 aa2.48□□□□□ -2.01
HUWE1-213ENST00000489876 CDC42SE1Q9NRR8 79 aa2.48□□□□□ -2.01
HUWE1-213ENST00000489876 MT1AP04731 61 aa2.44□□□□□ -2.02
HUWE1-213ENST00000489876 KTN1-AS1Q86SY8 53 aa2.39□□□□□ -2.03
HUWE1-213ENST00000489876 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
HUWE1-213ENST00000489876 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
HUWE1-213ENST00000489876 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
HUWE1-213ENST00000489876 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
HUWE1-213ENST00000489876 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
HUWE1-213ENST00000489876 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
HUWE1-213ENST00000489876 INE1O15225 51 aa1.67□□□□□ -2.14
HUWE1-213ENST00000489876 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
HUWE1-213ENST00000489876 PRM1P04553 51 aa1.32□□□□□ -2.2
HUWE1-213ENST00000489876 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
HUWE1-213ENST00000489876 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms