RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
SCMH1-216ENST00000489421 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
SCMH1-216ENST00000489421 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
SCMH1-216ENST00000489421 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
SCMH1-216ENST00000489421 R4GN34 69 aa3.2□□□□□ -1.9
SCMH1-216ENST00000489421 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
SCMH1-216ENST00000489421 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
SCMH1-216ENST00000489421 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
SCMH1-216ENST00000489421 A0A0D9SG42 100 aa3.14□□□□□ -1.91
SCMH1-216ENST00000489421 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
SCMH1-216ENST00000489421 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
SCMH1-216ENST00000489421 C10orf95Q9H7T3 257 aa3.11□□□□□ -1.91
SCMH1-216ENST00000489421 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
SCMH1-216ENST00000489421 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
SCMH1-216ENST00000489421 MT1BP07438 61 aa3.07□□□□□ -1.92
SCMH1-216ENST00000489421 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
SCMH1-216ENST00000489421 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
SCMH1-216ENST00000489421 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
SCMH1-216ENST00000489421 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
SCMH1-216ENST00000489421 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
SCMH1-216ENST00000489421 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
SCMH1-216ENST00000489421 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
SCMH1-216ENST00000489421 MT1XP80297 61 aa2.96□□□□□ -1.94
SCMH1-216ENST00000489421 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
SCMH1-216ENST00000489421 PRO2289Q9P1D8 64 aa2.91□□□□□ -1.94
SCMH1-216ENST00000489421 KMT2DO14686 5537 aa2.89□□□□□ -1.95
SCMH1-216ENST00000489421 TNP1P09430 55 aa2.85□□□□□ -1.95
SCMH1-216ENST00000489421 NEBP20929 6669 aa2.85□□□□□ -1.95
SCMH1-216ENST00000489421 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
SCMH1-216ENST00000489421 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
SCMH1-216ENST00000489421 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
SCMH1-216ENST00000489421 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
SCMH1-216ENST00000489421 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
SCMH1-216ENST00000489421 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
SCMH1-216ENST00000489421 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
SCMH1-216ENST00000489421 SPRR2EP22531 72 aa2.71□□□□□ -1.98
SCMH1-216ENST00000489421 SPRR2BP35325 72 aa2.71□□□□□ -1.98
SCMH1-216ENST00000489421 SPRR2AP35326 72 aa2.71□□□□□ -1.98
SCMH1-216ENST00000489421 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SCMH1-216ENST00000489421 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
SCMH1-216ENST00000489421 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
SCMH1-216ENST00000489421 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
SCMH1-216ENST00000489421 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.99
SCMH1-216ENST00000489421 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
SCMH1-216ENST00000489421 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
SCMH1-216ENST00000489421 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
SCMH1-216ENST00000489421 INE1O15225 51 aa2.61□□□□□ -1.99
SCMH1-216ENST00000489421 SPRR2DP22532 72 aa2.61□□□□□ -1.99
SCMH1-216ENST00000489421 MT1EP04732 61 aa2.6□□□□□ -1.99
SCMH1-216ENST00000489421 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
SCMH1-216ENST00000489421 MT1LQ93083 61 aa2.54□□□□□ -2
SCMH1-216ENST00000489421 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
SCMH1-216ENST00000489421 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
SCMH1-216ENST00000489421 MT1GP13640 62 aa2.48□□□□□ -2.01
SCMH1-216ENST00000489421 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
SCMH1-216ENST00000489421 MT1MQ8N339 61 aa2.44□□□□□ -2.02
SCMH1-216ENST00000489421 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SCMH1-216ENST00000489421 MT4P47944 62 aa2.31□□□□□ -2.04
SCMH1-216ENST00000489421 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
SCMH1-216ENST00000489421 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SCMH1-216ENST00000489421 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
SCMH1-216ENST00000489421 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
SCMH1-216ENST00000489421 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
SCMH1-216ENST00000489421 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
SCMH1-216ENST00000489421 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
SCMH1-216ENST00000489421 MT1AP04731 61 aa2.16□□□□□ -2.06
SCMH1-216ENST00000489421 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
SCMH1-216ENST00000489421 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
SCMH1-216ENST00000489421 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
SCMH1-216ENST00000489421 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
SCMH1-216ENST00000489421 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
SCMH1-216ENST00000489421 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
SCMH1-216ENST00000489421 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.13
SCMH1-216ENST00000489421 PRM1P04553 51 aa1.76□□□□□ -2.13
SCMH1-216ENST00000489421 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
SCMH1-216ENST00000489421 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
SCMH1-216ENST00000489421 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SCMH1-216ENST00000489421 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 105.4 ms