RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
NSMCE4A-211ENST00000489266 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
NSMCE4A-211ENST00000489266 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
NSMCE4A-211ENST00000489266 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
NSMCE4A-211ENST00000489266 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
NSMCE4A-211ENST00000489266 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
NSMCE4A-211ENST00000489266 MT1GP13640 62 aa6.57□□□□□ -1.36
NSMCE4A-211ENST00000489266 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
NSMCE4A-211ENST00000489266 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
NSMCE4A-211ENST00000489266 MT1MQ8N339 61 aa6.38□□□□□ -1.39
NSMCE4A-211ENST00000489266 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
NSMCE4A-211ENST00000489266 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
NSMCE4A-211ENST00000489266 PRM1P04553 51 aa6.32□□□□□ -1.4
NSMCE4A-211ENST00000489266 KRTAP9-7A8MTY7 169 aa6.3□□□□□ -1.4
NSMCE4A-211ENST00000489266 MT1AP04731 61 aa6.3□□□□□ -1.4
NSMCE4A-211ENST00000489266 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
NSMCE4A-211ENST00000489266 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
NSMCE4A-211ENST00000489266 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
NSMCE4A-211ENST00000489266 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
NSMCE4A-211ENST00000489266 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
NSMCE4A-211ENST00000489266 LCE3EQ5T5B0 92 aa6.18□□□□□ -1.42
NSMCE4A-211ENST00000489266 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
NSMCE4A-211ENST00000489266 SYNE1Q8NF91 8797 aaKnown RBP6.12□□□□□ -1.43
NSMCE4A-211ENST00000489266 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
NSMCE4A-211ENST00000489266 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
NSMCE4A-211ENST00000489266 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
NSMCE4A-211ENST00000489266 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
NSMCE4A-211ENST00000489266 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
NSMCE4A-211ENST00000489266 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
NSMCE4A-211ENST00000489266 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
NSMCE4A-211ENST00000489266 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
NSMCE4A-211ENST00000489266 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
NSMCE4A-211ENST00000489266 SYNE2Q8WXH0 6885 aaKnown RBP5.79□□□□□ -1.48
NSMCE4A-211ENST00000489266 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
NSMCE4A-211ENST00000489266 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
NSMCE4A-211ENST00000489266 SPRR2EP22531 72 aa5.56□□□□□ -1.52
NSMCE4A-211ENST00000489266 SPRR2BP35325 72 aa5.56□□□□□ -1.52
NSMCE4A-211ENST00000489266 SPRR2AP35326 72 aa5.56□□□□□ -1.52
NSMCE4A-211ENST00000489266 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
NSMCE4A-211ENST00000489266 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
NSMCE4A-211ENST00000489266 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
NSMCE4A-211ENST00000489266 SPRR2DP22532 72 aa5.33□□□□□ -1.56
NSMCE4A-211ENST00000489266 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
NSMCE4A-211ENST00000489266 NEBP20929 6669 aa5.27□□□□□ -1.57
NSMCE4A-211ENST00000489266 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
NSMCE4A-211ENST00000489266 MT3P25713 68 aa5.22□□□□□ -1.57
NSMCE4A-211ENST00000489266 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
NSMCE4A-211ENST00000489266 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
NSMCE4A-211ENST00000489266 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
NSMCE4A-211ENST00000489266 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
NSMCE4A-211ENST00000489266 MT4P47944 62 aa4.68□□□□□ -1.66
NSMCE4A-211ENST00000489266 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
NSMCE4A-211ENST00000489266 KRTAP5-2Q701N4 177 aa4.58□□□□□ -1.68
NSMCE4A-211ENST00000489266 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
NSMCE4A-211ENST00000489266 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
NSMCE4A-211ENST00000489266 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
NSMCE4A-211ENST00000489266 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
NSMCE4A-211ENST00000489266 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
NSMCE4A-211ENST00000489266 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
NSMCE4A-211ENST00000489266 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
NSMCE4A-211ENST00000489266 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
NSMCE4A-211ENST00000489266 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
NSMCE4A-211ENST00000489266 KRTAP21-1Q3LI58 79 aa4.09□□□□□ -1.75
NSMCE4A-211ENST00000489266 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
NSMCE4A-211ENST00000489266 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
NSMCE4A-211ENST00000489266 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
NSMCE4A-211ENST00000489266 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
NSMCE4A-211ENST00000489266 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
NSMCE4A-211ENST00000489266 KRTAP21-2Q3LI59 83 aa3.82□□□□□ -1.8
NSMCE4A-211ENST00000489266 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
NSMCE4A-211ENST00000489266 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
NSMCE4A-211ENST00000489266 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
NSMCE4A-211ENST00000489266 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
NSMCE4A-211ENST00000489266 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
NSMCE4A-211ENST00000489266 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
NSMCE4A-211ENST00000489266 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
NSMCE4A-211ENST00000489266 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
NSMCE4A-211ENST00000489266 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 99.5 ms