RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
VTI1A-206ENST00000489142 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
VTI1A-206ENST00000489142 A0A1B0GU69 56 aa5.19□□□□□ -1.58
VTI1A-206ENST00000489142 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
VTI1A-206ENST00000489142 A8MU10 97 aa5.18□□□□□ -1.58
VTI1A-206ENST00000489142 KRTAP19-3Q7Z4W3 81 aa5.17□□□□□ -1.58
VTI1A-206ENST00000489142 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
VTI1A-206ENST00000489142 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
VTI1A-206ENST00000489142 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
VTI1A-206ENST00000489142 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
VTI1A-206ENST00000489142 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
VTI1A-206ENST00000489142 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
VTI1A-206ENST00000489142 MT1GP13640 62 aa5.03□□□□□ -1.6
VTI1A-206ENST00000489142 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
VTI1A-206ENST00000489142 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
VTI1A-206ENST00000489142 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
VTI1A-206ENST00000489142 MT1LQ93083 61 aa4.99□□□□□ -1.61
VTI1A-206ENST00000489142 TNP1P09430 55 aa4.98□□□□□ -1.61
VTI1A-206ENST00000489142 MT1MQ8N339 61 aa4.98□□□□□ -1.61
VTI1A-206ENST00000489142 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
VTI1A-206ENST00000489142 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
VTI1A-206ENST00000489142 PSPHP1O15172 72 aa4.93□□□□□ -1.62
VTI1A-206ENST00000489142 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
VTI1A-206ENST00000489142 UQCR11O14957 56 aa4.92□□□□□ -1.62
VTI1A-206ENST00000489142 MT4P47944 62 aa4.85□□□□□ -1.63
VTI1A-206ENST00000489142 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
VTI1A-206ENST00000489142 Q1T7F1 81 aa4.82□□□□□ -1.64
VTI1A-206ENST00000489142 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
VTI1A-206ENST00000489142 GPR98Q8WXG9 6306 aa4.77□□□□□ -1.65
VTI1A-206ENST00000489142 K7ERS5 55 aa4.75□□□□□ -1.65
VTI1A-206ENST00000489142 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
VTI1A-206ENST00000489142 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
VTI1A-206ENST00000489142 A6NED7 52 aa4.69□□□□□ -1.66
VTI1A-206ENST00000489142 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
VTI1A-206ENST00000489142 AHNAK2Q8IVF2 5795 aa4.56□□□□□ -1.68
VTI1A-206ENST00000489142 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
VTI1A-206ENST00000489142 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
VTI1A-206ENST00000489142 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
VTI1A-206ENST00000489142 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
VTI1A-206ENST00000489142 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
VTI1A-206ENST00000489142 ROMO1P60602 79 aa4.44□□□□□ -1.7
VTI1A-206ENST00000489142 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
VTI1A-206ENST00000489142 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
VTI1A-206ENST00000489142 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
VTI1A-206ENST00000489142 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
VTI1A-206ENST00000489142 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
VTI1A-206ENST00000489142 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
VTI1A-206ENST00000489142 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
VTI1A-206ENST00000489142 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
VTI1A-206ENST00000489142 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
VTI1A-206ENST00000489142 MT1AP04731 61 aa4.23□□□□□ -1.73
VTI1A-206ENST00000489142 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
VTI1A-206ENST00000489142 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
VTI1A-206ENST00000489142 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
VTI1A-206ENST00000489142 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
VTI1A-206ENST00000489142 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
VTI1A-206ENST00000489142 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
VTI1A-206ENST00000489142 MT3P25713 68 aa3.85□□□□□ -1.79
VTI1A-206ENST00000489142 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
VTI1A-206ENST00000489142 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
VTI1A-206ENST00000489142 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
VTI1A-206ENST00000489142 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
VTI1A-206ENST00000489142 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
VTI1A-206ENST00000489142 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
VTI1A-206ENST00000489142 INE1O15225 51 aa3.58□□□□□ -1.84
VTI1A-206ENST00000489142 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
VTI1A-206ENST00000489142 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
VTI1A-206ENST00000489142 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
VTI1A-206ENST00000489142 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
VTI1A-206ENST00000489142 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
VTI1A-206ENST00000489142 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
VTI1A-206ENST00000489142 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
VTI1A-206ENST00000489142 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
VTI1A-206ENST00000489142 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
VTI1A-206ENST00000489142 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
VTI1A-206ENST00000489142 PRM1P04553 51 aa2.26□□□□□ -2.05
VTI1A-206ENST00000489142 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
VTI1A-206ENST00000489142 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 83.5 ms