RNA–Protein interactions for RNA: ENST00000488687.5

PSME4-209, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 3,073 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-209ENST00000488687 MT1HP80294 61 aa2.8□□□□□ -1.96
PSME4-209ENST00000488687 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
PSME4-209ENST00000488687 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
PSME4-209ENST00000488687 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
PSME4-209ENST00000488687 INE1O15225 51 aa2.73□□□□□ -1.97
PSME4-209ENST00000488687 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
PSME4-209ENST00000488687 USH2AO75445 5202 aa2.71□□□□□ -1.97
PSME4-209ENST00000488687 MT2AP02795 61 aa2.71□□□□□ -1.98
PSME4-209ENST00000488687 MT1FP04733 61 aa2.7□□□□□ -1.98
PSME4-209ENST00000488687 SPRR2GQ9BYE4 73 aa2.7□□□□□ -1.98
PSME4-209ENST00000488687 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
PSME4-209ENST00000488687 PP632Q6XCG6 107 aa2.65□□□□□ -1.98
PSME4-209ENST00000488687 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
PSME4-209ENST00000488687 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
PSME4-209ENST00000488687 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
PSME4-209ENST00000488687 TNP1P09430 55 aa2.61□□□□□ -1.99
PSME4-209ENST00000488687 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
PSME4-209ENST00000488687 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
PSME4-209ENST00000488687 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
PSME4-209ENST00000488687 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
PSME4-209ENST00000488687 MT3P25713 68 aa2.6□□□□□ -1.99
PSME4-209ENST00000488687 MT1BP07438 61 aa2.56□□□□□ -2
PSME4-209ENST00000488687 KRTAP5-9P26371 169 aa2.55□□□□□ -2
PSME4-209ENST00000488687 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
PSME4-209ENST00000488687 MT1XP80297 61 aa2.51□□□□□ -2.01
PSME4-209ENST00000488687 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
PSME4-209ENST00000488687 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
PSME4-209ENST00000488687 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
PSME4-209ENST00000488687 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.01
PSME4-209ENST00000488687 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
PSME4-209ENST00000488687 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
PSME4-209ENST00000488687 KRTAP8-1Q8IUC2 63 aa2.39□□□□□ -2.03
PSME4-209ENST00000488687 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
PSME4-209ENST00000488687 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
PSME4-209ENST00000488687 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
PSME4-209ENST00000488687 KMT2DO14686 5537 aa2.35□□□□□ -2.03
PSME4-209ENST00000488687 KRTAP19-5Q3LI72 72 aa2.31□□□□□ -2.04
PSME4-209ENST00000488687 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
PSME4-209ENST00000488687 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
PSME4-209ENST00000488687 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
PSME4-209ENST00000488687 MT1EP04732 61 aa2.19□□□□□ -2.06
PSME4-209ENST00000488687 SPRR2EP22531 72 aa2.18□□□□□ -2.06
PSME4-209ENST00000488687 SPRR2BP35325 72 aa2.18□□□□□ -2.06
PSME4-209ENST00000488687 SPRR2AP35326 72 aa2.18□□□□□ -2.06
PSME4-209ENST00000488687 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
PSME4-209ENST00000488687 MT1LQ93083 61 aa2.16□□□□□ -2.06
PSME4-209ENST00000488687 SPRR2DP22532 72 aa2.11□□□□□ -2.07
PSME4-209ENST00000488687 KRTAP19-3Q7Z4W3 81 aa2.1□□□□□ -2.07
PSME4-209ENST00000488687 MT1GP13640 62 aa2.09□□□□□ -2.07
PSME4-209ENST00000488687 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
PSME4-209ENST00000488687 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
PSME4-209ENST00000488687 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
PSME4-209ENST00000488687 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
PSME4-209ENST00000488687 MT1MQ8N339 61 aa2.06□□□□□ -2.08
PSME4-209ENST00000488687 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
PSME4-209ENST00000488687 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
PSME4-209ENST00000488687 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
PSME4-209ENST00000488687 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
PSME4-209ENST00000488687 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
PSME4-209ENST00000488687 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
PSME4-209ENST00000488687 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
PSME4-209ENST00000488687 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
PSME4-209ENST00000488687 MT4P47944 62 aa1.87□□□□□ -2.11
PSME4-209ENST00000488687 MT1AP04731 61 aa1.83□□□□□ -2.12
PSME4-209ENST00000488687 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
PSME4-209ENST00000488687 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
PSME4-209ENST00000488687 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
PSME4-209ENST00000488687 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
PSME4-209ENST00000488687 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
PSME4-209ENST00000488687 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
PSME4-209ENST00000488687 PRM1P04553 51 aa1.61□□□□□ -2.15
PSME4-209ENST00000488687 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
PSME4-209ENST00000488687 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
PSME4-209ENST00000488687 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
PSME4-209ENST00000488687 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
PSME4-209ENST00000488687 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
PSME4-209ENST00000488687 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
PSME4-209ENST00000488687 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms