RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
ZEB1-206ENST00000488625 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
ZEB1-206ENST00000488625 RNF213Q63HN8 5207 aa3.2□□□□□ -1.9
ZEB1-206ENST00000488625 MUC2Q02817 5179 aa3.2□□□□□ -1.9
ZEB1-206ENST00000488625 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
ZEB1-206ENST00000488625 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
ZEB1-206ENST00000488625 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
ZEB1-206ENST00000488625 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
ZEB1-206ENST00000488625 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
ZEB1-206ENST00000488625 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
ZEB1-206ENST00000488625 MT1MQ8N339 61 aa3.11□□□□□ -1.91
ZEB1-206ENST00000488625 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
ZEB1-206ENST00000488625 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
ZEB1-206ENST00000488625 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
ZEB1-206ENST00000488625 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
ZEB1-206ENST00000488625 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
ZEB1-206ENST00000488625 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
ZEB1-206ENST00000488625 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
ZEB1-206ENST00000488625 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
ZEB1-206ENST00000488625 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
ZEB1-206ENST00000488625 MT3P25713 68 aa2.98□□□□□ -1.93
ZEB1-206ENST00000488625 MT4P47944 62 aa2.95□□□□□ -1.94
ZEB1-206ENST00000488625 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
ZEB1-206ENST00000488625 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
ZEB1-206ENST00000488625 PRM1P04553 51 aa2.89□□□□□ -1.95
ZEB1-206ENST00000488625 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
ZEB1-206ENST00000488625 MT1AP04731 61 aa2.86□□□□□ -1.95
ZEB1-206ENST00000488625 KMT2DO14686 5537 aa2.82□□□□□ -1.96
ZEB1-206ENST00000488625 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
ZEB1-206ENST00000488625 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
ZEB1-206ENST00000488625 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
ZEB1-206ENST00000488625 USH2AO75445 5202 aa2.71□□□□□ -1.98
ZEB1-206ENST00000488625 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
ZEB1-206ENST00000488625 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
ZEB1-206ENST00000488625 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
ZEB1-206ENST00000488625 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
ZEB1-206ENST00000488625 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.98
ZEB1-206ENST00000488625 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
ZEB1-206ENST00000488625 SSPOA2VEC9 5147 aa2.59□□□□□ -2
ZEB1-206ENST00000488625 NEBP20929 6669 aa2.56□□□□□ -2
ZEB1-206ENST00000488625 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
ZEB1-206ENST00000488625 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
ZEB1-206ENST00000488625 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
ZEB1-206ENST00000488625 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
ZEB1-206ENST00000488625 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
ZEB1-206ENST00000488625 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
ZEB1-206ENST00000488625 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
ZEB1-206ENST00000488625 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.03
ZEB1-206ENST00000488625 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
ZEB1-206ENST00000488625 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
ZEB1-206ENST00000488625 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
ZEB1-206ENST00000488625 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
ZEB1-206ENST00000488625 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
ZEB1-206ENST00000488625 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
ZEB1-206ENST00000488625 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
ZEB1-206ENST00000488625 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
ZEB1-206ENST00000488625 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
ZEB1-206ENST00000488625 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
ZEB1-206ENST00000488625 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
ZEB1-206ENST00000488625 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
ZEB1-206ENST00000488625 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
ZEB1-206ENST00000488625 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
ZEB1-206ENST00000488625 KRTAP5-2Q701N4 177 aa1.85□□□□□ -2.11
ZEB1-206ENST00000488625 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
ZEB1-206ENST00000488625 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
ZEB1-206ENST00000488625 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
ZEB1-206ENST00000488625 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
ZEB1-206ENST00000488625 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
ZEB1-206ENST00000488625 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
ZEB1-206ENST00000488625 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
ZEB1-206ENST00000488625 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
ZEB1-206ENST00000488625 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.16
ZEB1-206ENST00000488625 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
ZEB1-206ENST00000488625 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
ZEB1-206ENST00000488625 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
ZEB1-206ENST00000488625 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
ZEB1-206ENST00000488625 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
ZEB1-206ENST00000488625 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 147.8 ms