RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
HDLBP-242ENST00000488013 ROMO1P60602 79 aa4.44□□□□□ -1.7
HDLBP-242ENST00000488013 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
HDLBP-242ENST00000488013 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
HDLBP-242ENST00000488013 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
HDLBP-242ENST00000488013 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
HDLBP-242ENST00000488013 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
HDLBP-242ENST00000488013 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
HDLBP-242ENST00000488013 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
HDLBP-242ENST00000488013 KMT2DO14686 5537 aa4.36□□□□□ -1.71
HDLBP-242ENST00000488013 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
HDLBP-242ENST00000488013 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
HDLBP-242ENST00000488013 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
HDLBP-242ENST00000488013 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
HDLBP-242ENST00000488013 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
HDLBP-242ENST00000488013 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
HDLBP-242ENST00000488013 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
HDLBP-242ENST00000488013 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
HDLBP-242ENST00000488013 MT3P25713 68 aa4.14□□□□□ -1.75
HDLBP-242ENST00000488013 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
HDLBP-242ENST00000488013 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
HDLBP-242ENST00000488013 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
HDLBP-242ENST00000488013 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
HDLBP-242ENST00000488013 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
HDLBP-242ENST00000488013 MT1EP04732 61 aa4.05□□□□□ -1.76
HDLBP-242ENST00000488013 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
HDLBP-242ENST00000488013 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
HDLBP-242ENST00000488013 SPRR2EP22531 72 aa3.97□□□□□ -1.77
HDLBP-242ENST00000488013 SPRR2BP35325 72 aa3.97□□□□□ -1.77
HDLBP-242ENST00000488013 SPRR2AP35326 72 aa3.97□□□□□ -1.77
HDLBP-242ENST00000488013 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
HDLBP-242ENST00000488013 MT1GP13640 62 aa3.95□□□□□ -1.78
HDLBP-242ENST00000488013 MT1LQ93083 61 aa3.94□□□□□ -1.78
HDLBP-242ENST00000488013 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
HDLBP-242ENST00000488013 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
HDLBP-242ENST00000488013 SPRR2DP22532 72 aa3.84□□□□□ -1.79
HDLBP-242ENST00000488013 MT1MQ8N339 61 aa3.82□□□□□ -1.8
HDLBP-242ENST00000488013 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
HDLBP-242ENST00000488013 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
HDLBP-242ENST00000488013 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
HDLBP-242ENST00000488013 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
HDLBP-242ENST00000488013 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
HDLBP-242ENST00000488013 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
HDLBP-242ENST00000488013 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
HDLBP-242ENST00000488013 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
HDLBP-242ENST00000488013 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
HDLBP-242ENST00000488013 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
HDLBP-242ENST00000488013 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
HDLBP-242ENST00000488013 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
HDLBP-242ENST00000488013 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
HDLBP-242ENST00000488013 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
HDLBP-242ENST00000488013 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
HDLBP-242ENST00000488013 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
HDLBP-242ENST00000488013 MT1AP04731 61 aa3.38□□□□□ -1.87
HDLBP-242ENST00000488013 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
HDLBP-242ENST00000488013 MT4P47944 62 aa3.29□□□□□ -1.88
HDLBP-242ENST00000488013 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
HDLBP-242ENST00000488013 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
HDLBP-242ENST00000488013 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
HDLBP-242ENST00000488013 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
HDLBP-242ENST00000488013 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
HDLBP-242ENST00000488013 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
HDLBP-242ENST00000488013 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
HDLBP-242ENST00000488013 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
HDLBP-242ENST00000488013 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
HDLBP-242ENST00000488013 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
HDLBP-242ENST00000488013 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
HDLBP-242ENST00000488013 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
HDLBP-242ENST00000488013 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
HDLBP-242ENST00000488013 INE1O15225 51 aa2.69□□□□□ -1.98
HDLBP-242ENST00000488013 LCE1CQ5T751 118 aa2.56□□□□□ -2
HDLBP-242ENST00000488013 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
HDLBP-242ENST00000488013 PRM1P04553 51 aa2.25□□□□□ -2.05
HDLBP-242ENST00000488013 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
HDLBP-242ENST00000488013 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
HDLBP-242ENST00000488013 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
HDLBP-242ENST00000488013 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
HDLBP-242ENST00000488013 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms