RNA–Protein interactions for RNA: ENST00000488007.5

IFFO1-210, Transcript of intermediate filament family orphan 1, humanhuman

TSL 5

Gene IFFO1, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-210ENST00000488007 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
IFFO1-210ENST00000488007 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
IFFO1-210ENST00000488007 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
IFFO1-210ENST00000488007 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
IFFO1-210ENST00000488007 MT1LQ93083 61 aa4.6□□□□□ -1.67
IFFO1-210ENST00000488007 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
IFFO1-210ENST00000488007 MT1GP13640 62 aa4.54□□□□□ -1.68
IFFO1-210ENST00000488007 SSPOA2VEC9 5147 aa4.53□□□□□ -1.68
IFFO1-210ENST00000488007 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
IFFO1-210ENST00000488007 MT1EP04732 61 aa4.49□□□□□ -1.69
IFFO1-210ENST00000488007 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
IFFO1-210ENST00000488007 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
IFFO1-210ENST00000488007 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
IFFO1-210ENST00000488007 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
IFFO1-210ENST00000488007 PRM1P04553 51 aa4.37□□□□□ -1.71
IFFO1-210ENST00000488007 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
IFFO1-210ENST00000488007 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
IFFO1-210ENST00000488007 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
IFFO1-210ENST00000488007 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
IFFO1-210ENST00000488007 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
IFFO1-210ENST00000488007 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
IFFO1-210ENST00000488007 MT1MQ8N339 61 aa4.17□□□□□ -1.74
IFFO1-210ENST00000488007 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
IFFO1-210ENST00000488007 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
IFFO1-210ENST00000488007 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
IFFO1-210ENST00000488007 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
IFFO1-210ENST00000488007 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.76
IFFO1-210ENST00000488007 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
IFFO1-210ENST00000488007 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
IFFO1-210ENST00000488007 MT1AP04731 61 aa4□□□□□ -1.77
IFFO1-210ENST00000488007 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
IFFO1-210ENST00000488007 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
IFFO1-210ENST00000488007 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
IFFO1-210ENST00000488007 KRTAP19-6Q3LI70 58 aa3.92□□□□□ -1.78
IFFO1-210ENST00000488007 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
IFFO1-210ENST00000488007 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
IFFO1-210ENST00000488007 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
IFFO1-210ENST00000488007 SPRR2EP22531 72 aa3.57□□□□□ -1.84
IFFO1-210ENST00000488007 SPRR2BP35325 72 aa3.57□□□□□ -1.84
IFFO1-210ENST00000488007 SPRR2AP35326 72 aa3.57□□□□□ -1.84
IFFO1-210ENST00000488007 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
IFFO1-210ENST00000488007 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
IFFO1-210ENST00000488007 NEBP20929 6669 aa3.44□□□□□ -1.86
IFFO1-210ENST00000488007 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
IFFO1-210ENST00000488007 MT3P25713 68 aa3.38□□□□□ -1.87
IFFO1-210ENST00000488007 SPRR2DP22532 72 aa3.37□□□□□ -1.87
IFFO1-210ENST00000488007 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
IFFO1-210ENST00000488007 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
IFFO1-210ENST00000488007 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
IFFO1-210ENST00000488007 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
IFFO1-210ENST00000488007 MT4P47944 62 aa3.25□□□□□ -1.89
IFFO1-210ENST00000488007 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
IFFO1-210ENST00000488007 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
IFFO1-210ENST00000488007 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
IFFO1-210ENST00000488007 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
IFFO1-210ENST00000488007 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
IFFO1-210ENST00000488007 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
IFFO1-210ENST00000488007 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.94
IFFO1-210ENST00000488007 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
IFFO1-210ENST00000488007 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
IFFO1-210ENST00000488007 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
IFFO1-210ENST00000488007 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
IFFO1-210ENST00000488007 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
IFFO1-210ENST00000488007 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
IFFO1-210ENST00000488007 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
IFFO1-210ENST00000488007 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
IFFO1-210ENST00000488007 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
IFFO1-210ENST00000488007 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
IFFO1-210ENST00000488007 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
IFFO1-210ENST00000488007 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
IFFO1-210ENST00000488007 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
IFFO1-210ENST00000488007 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
IFFO1-210ENST00000488007 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
IFFO1-210ENST00000488007 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
IFFO1-210ENST00000488007 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
IFFO1-210ENST00000488007 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
IFFO1-210ENST00000488007 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
IFFO1-210ENST00000488007 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 100.3 ms