RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 KRTAP2-2Q9BYT5 123 aa6.53□□□□□ -1.36
HMG20B-212ENST00000487894 KRTAP2-1Q9BYU5 128 aa6.53□□□□□ -1.36
HMG20B-212ENST00000487894 SPRR2DP22532 72 aa6.49□□□□□ -1.37
HMG20B-212ENST00000487894 KRTAP19-7Q3SYF9 63 aa6.42□□□□□ -1.38
HMG20B-212ENST00000487894 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
HMG20B-212ENST00000487894 UQCR11O14957 56 aa6.38□□□□□ -1.39
HMG20B-212ENST00000487894 PSPHP1O15172 72 aa6.36□□□□□ -1.39
HMG20B-212ENST00000487894 MT1EP04732 61 aa6.35□□□□□ -1.39
HMG20B-212ENST00000487894 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
HMG20B-212ENST00000487894 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
HMG20B-212ENST00000487894 KRTAP19-3Q7Z4W3 81 aa6.26□□□□□ -1.41
HMG20B-212ENST00000487894 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
HMG20B-212ENST00000487894 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
HMG20B-212ENST00000487894 TNP1P09430 55 aa6.24□□□□□ -1.41
HMG20B-212ENST00000487894 A6NED7 52 aa6.21□□□□□ -1.42
HMG20B-212ENST00000487894 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
HMG20B-212ENST00000487894 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
HMG20B-212ENST00000487894 MT1GP13640 62 aa6.11□□□□□ -1.43
HMG20B-212ENST00000487894 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
HMG20B-212ENST00000487894 MT1LQ93083 61 aa6.09□□□□□ -1.43
HMG20B-212ENST00000487894 CDC42SE1Q9NRR8 79 aa6.09□□□□□ -1.43
HMG20B-212ENST00000487894 K7ERS5 55 aa6.08□□□□□ -1.44
HMG20B-212ENST00000487894 PP632Q6XCG6 107 aa6.04□□□□□ -1.44
HMG20B-212ENST00000487894 MT1MQ8N339 61 aa6.04□□□□□ -1.44
HMG20B-212ENST00000487894 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
HMG20B-212ENST00000487894 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.46
HMG20B-212ENST00000487894 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
HMG20B-212ENST00000487894 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
HMG20B-212ENST00000487894 MT3P25713 68 aa5.9□□□□□ -1.46
HMG20B-212ENST00000487894 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
HMG20B-212ENST00000487894 BRK1Q8WUW1 75 aa5.88□□□□□ -1.47
HMG20B-212ENST00000487894 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
HMG20B-212ENST00000487894 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
HMG20B-212ENST00000487894 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
HMG20B-212ENST00000487894 ROMO1P60602 79 aa5.73□□□□□ -1.49
HMG20B-212ENST00000487894 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
HMG20B-212ENST00000487894 AHNAK2Q8IVF2 5795 aa5.68□□□□□ -1.5
HMG20B-212ENST00000487894 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
HMG20B-212ENST00000487894 MT4P47944 62 aa5.66□□□□□ -1.5
HMG20B-212ENST00000487894 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
HMG20B-212ENST00000487894 KRTAP5-10Q6L8G5 202 aa5.57□□□□□ -1.52
HMG20B-212ENST00000487894 LCE1FQ5T754 118 aa5.55□□□□□ -1.52
HMG20B-212ENST00000487894 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
HMG20B-212ENST00000487894 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
HMG20B-212ENST00000487894 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
HMG20B-212ENST00000487894 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
HMG20B-212ENST00000487894 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
HMG20B-212ENST00000487894 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
HMG20B-212ENST00000487894 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
HMG20B-212ENST00000487894 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
HMG20B-212ENST00000487894 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
HMG20B-212ENST00000487894 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
HMG20B-212ENST00000487894 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
HMG20B-212ENST00000487894 MT1AP04731 61 aa5.18□□□□□ -1.58
HMG20B-212ENST00000487894 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
HMG20B-212ENST00000487894 KRTAP5-2Q701N4 177 aa5.01□□□□□ -1.61
HMG20B-212ENST00000487894 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
HMG20B-212ENST00000487894 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
HMG20B-212ENST00000487894 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
HMG20B-212ENST00000487894 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
HMG20B-212ENST00000487894 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.66
HMG20B-212ENST00000487894 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
HMG20B-212ENST00000487894 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
HMG20B-212ENST00000487894 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
HMG20B-212ENST00000487894 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
HMG20B-212ENST00000487894 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
HMG20B-212ENST00000487894 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
HMG20B-212ENST00000487894 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
HMG20B-212ENST00000487894 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
HMG20B-212ENST00000487894 INE1O15225 51 aa3.78□□□□□ -1.8
HMG20B-212ENST00000487894 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
HMG20B-212ENST00000487894 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
HMG20B-212ENST00000487894 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
HMG20B-212ENST00000487894 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
HMG20B-212ENST00000487894 PRM1P04553 51 aa2.93□□□□□ -1.94
HMG20B-212ENST00000487894 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
HMG20B-212ENST00000487894 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
HMG20B-212ENST00000487894 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 97.6 ms