RNA–Protein interactions for RNA: ENST00000487803.5

SMIM7-209, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best)

Gene SMIM7, Length 2,190 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-209ENST00000487803 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
SMIM7-209ENST00000487803 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
SMIM7-209ENST00000487803 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
SMIM7-209ENST00000487803 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
SMIM7-209ENST00000487803 USH2AO75445 5202 aa3.89□□□□□ -1.79
SMIM7-209ENST00000487803 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
SMIM7-209ENST00000487803 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
SMIM7-209ENST00000487803 KMT2DO14686 5537 aa3.79□□□□□ -1.8
SMIM7-209ENST00000487803 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
SMIM7-209ENST00000487803 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SMIM7-209ENST00000487803 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
SMIM7-209ENST00000487803 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
SMIM7-209ENST00000487803 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
SMIM7-209ENST00000487803 MT1EP04732 61 aa3.61□□□□□ -1.83
SMIM7-209ENST00000487803 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
SMIM7-209ENST00000487803 MT1LQ93083 61 aa3.59□□□□□ -1.84
SMIM7-209ENST00000487803 INE1O15225 51 aa3.56□□□□□ -1.84
SMIM7-209ENST00000487803 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
SMIM7-209ENST00000487803 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
SMIM7-209ENST00000487803 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SMIM7-209ENST00000487803 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SMIM7-209ENST00000487803 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
SMIM7-209ENST00000487803 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
SMIM7-209ENST00000487803 MT1GP13640 62 aa3.42□□□□□ -1.86
SMIM7-209ENST00000487803 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
SMIM7-209ENST00000487803 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
SMIM7-209ENST00000487803 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
SMIM7-209ENST00000487803 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
SMIM7-209ENST00000487803 MT1MQ8N339 61 aa3.37□□□□□ -1.87
SMIM7-209ENST00000487803 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
SMIM7-209ENST00000487803 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
SMIM7-209ENST00000487803 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
SMIM7-209ENST00000487803 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
SMIM7-209ENST00000487803 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
SMIM7-209ENST00000487803 SPRR2EP22531 72 aa3.21□□□□□ -1.9
SMIM7-209ENST00000487803 SPRR2BP35325 72 aa3.21□□□□□ -1.9
SMIM7-209ENST00000487803 SPRR2AP35326 72 aa3.21□□□□□ -1.9
SMIM7-209ENST00000487803 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
SMIM7-209ENST00000487803 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
SMIM7-209ENST00000487803 NEBP20929 6669 aa3.14□□□□□ -1.91
SMIM7-209ENST00000487803 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
SMIM7-209ENST00000487803 SPRR2DP22532 72 aa3.1□□□□□ -1.91
SMIM7-209ENST00000487803 MT1AP04731 61 aa3.03□□□□□ -1.92
SMIM7-209ENST00000487803 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
SMIM7-209ENST00000487803 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
SMIM7-209ENST00000487803 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
SMIM7-209ENST00000487803 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
SMIM7-209ENST00000487803 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
SMIM7-209ENST00000487803 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
SMIM7-209ENST00000487803 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
SMIM7-209ENST00000487803 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
SMIM7-209ENST00000487803 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SMIM7-209ENST00000487803 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
SMIM7-209ENST00000487803 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SMIM7-209ENST00000487803 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
SMIM7-209ENST00000487803 MT3P25713 68 aa2.73□□□□□ -1.97
SMIM7-209ENST00000487803 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
SMIM7-209ENST00000487803 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SMIM7-209ENST00000487803 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
SMIM7-209ENST00000487803 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
SMIM7-209ENST00000487803 MT4P47944 62 aa2.67□□□□□ -1.98
SMIM7-209ENST00000487803 PRM1P04553 51 aa2.65□□□□□ -1.99
SMIM7-209ENST00000487803 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
SMIM7-209ENST00000487803 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
SMIM7-209ENST00000487803 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
SMIM7-209ENST00000487803 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
SMIM7-209ENST00000487803 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
SMIM7-209ENST00000487803 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
SMIM7-209ENST00000487803 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
SMIM7-209ENST00000487803 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
SMIM7-209ENST00000487803 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
SMIM7-209ENST00000487803 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SMIM7-209ENST00000487803 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
SMIM7-209ENST00000487803 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
SMIM7-209ENST00000487803 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
SMIM7-209ENST00000487803 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
SMIM7-209ENST00000487803 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
SMIM7-209ENST00000487803 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 31 ms