RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SPRR2BP35325 72 aa3.86□□□□□ -1.79
TRA2B-214ENST00000487615 SPRR2AP35326 72 aa3.86□□□□□ -1.79
TRA2B-214ENST00000487615 MT1MQ8N339 61 aa3.82□□□□□ -1.8
TRA2B-214ENST00000487615 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
TRA2B-214ENST00000487615 USH2AO75445 5202 aa3.76□□□□□ -1.81
TRA2B-214ENST00000487615 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
TRA2B-214ENST00000487615 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
TRA2B-214ENST00000487615 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
TRA2B-214ENST00000487615 SPRR2DP22532 72 aa3.72□□□□□ -1.81
TRA2B-214ENST00000487615 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
TRA2B-214ENST00000487615 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
TRA2B-214ENST00000487615 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
TRA2B-214ENST00000487615 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
TRA2B-214ENST00000487615 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
TRA2B-214ENST00000487615 KMT2DO14686 5537 aa3.64□□□□□ -1.83
TRA2B-214ENST00000487615 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
TRA2B-214ENST00000487615 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
TRA2B-214ENST00000487615 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
TRA2B-214ENST00000487615 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
TRA2B-214ENST00000487615 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
TRA2B-214ENST00000487615 MT1AP04731 61 aa3.49□□□□□ -1.85
TRA2B-214ENST00000487615 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
TRA2B-214ENST00000487615 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
TRA2B-214ENST00000487615 LCE1AQ5T7P2 110 aa3.42□□□□□ -1.86
TRA2B-214ENST00000487615 MT3P25713 68 aa3.41□□□□□ -1.86
TRA2B-214ENST00000487615 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
TRA2B-214ENST00000487615 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
TRA2B-214ENST00000487615 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
TRA2B-214ENST00000487615 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
TRA2B-214ENST00000487615 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
TRA2B-214ENST00000487615 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TRA2B-214ENST00000487615 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
TRA2B-214ENST00000487615 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
TRA2B-214ENST00000487615 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
TRA2B-214ENST00000487615 MT4P47944 62 aa3.28□□□□□ -1.88
TRA2B-214ENST00000487615 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.88
TRA2B-214ENST00000487615 PRM1P04553 51 aa3.26□□□□□ -1.89
TRA2B-214ENST00000487615 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
TRA2B-214ENST00000487615 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
TRA2B-214ENST00000487615 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
TRA2B-214ENST00000487615 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
TRA2B-214ENST00000487615 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
TRA2B-214ENST00000487615 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
TRA2B-214ENST00000487615 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
TRA2B-214ENST00000487615 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TRA2B-214ENST00000487615 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
TRA2B-214ENST00000487615 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
TRA2B-214ENST00000487615 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
TRA2B-214ENST00000487615 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
TRA2B-214ENST00000487615 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
TRA2B-214ENST00000487615 NEBP20929 6669 aa2.8□□□□□ -1.96
TRA2B-214ENST00000487615 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
TRA2B-214ENST00000487615 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
TRA2B-214ENST00000487615 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
TRA2B-214ENST00000487615 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -2
TRA2B-214ENST00000487615 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
TRA2B-214ENST00000487615 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
TRA2B-214ENST00000487615 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
TRA2B-214ENST00000487615 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
TRA2B-214ENST00000487615 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TRA2B-214ENST00000487615 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
TRA2B-214ENST00000487615 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
TRA2B-214ENST00000487615 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TRA2B-214ENST00000487615 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
TRA2B-214ENST00000487615 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
TRA2B-214ENST00000487615 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
TRA2B-214ENST00000487615 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
TRA2B-214ENST00000487615 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
TRA2B-214ENST00000487615 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
TRA2B-214ENST00000487615 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
TRA2B-214ENST00000487615 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
TRA2B-214ENST00000487615 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
TRA2B-214ENST00000487615 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
TRA2B-214ENST00000487615 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
TRA2B-214ENST00000487615 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
TRA2B-214ENST00000487615 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
TRA2B-214ENST00000487615 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
TRA2B-214ENST00000487615 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 256.7 ms