RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 SPRR2EP22531 72 aa3.46□□□□□ -1.86
MCF2L-227ENST00000486806 SPRR2BP35325 72 aa3.46□□□□□ -1.86
MCF2L-227ENST00000486806 SPRR2AP35326 72 aa3.46□□□□□ -1.86
MCF2L-227ENST00000486806 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
MCF2L-227ENST00000486806 MT1LQ93083 61 aa3.43□□□□□ -1.86
MCF2L-227ENST00000486806 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
MCF2L-227ENST00000486806 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
MCF2L-227ENST00000486806 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
MCF2L-227ENST00000486806 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
MCF2L-227ENST00000486806 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
MCF2L-227ENST00000486806 MT1GP13640 62 aa3.37□□□□□ -1.87
MCF2L-227ENST00000486806 KRTAP15-1Q3LI76 137 aa3.37□□□□□ -1.87
MCF2L-227ENST00000486806 SPRR2DP22532 72 aa3.34□□□□□ -1.87
MCF2L-227ENST00000486806 MT1MQ8N339 61 aa3.34□□□□□ -1.87
MCF2L-227ENST00000486806 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
MCF2L-227ENST00000486806 H3BS24 57 aa3.3□□□□□ -1.88
MCF2L-227ENST00000486806 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
MCF2L-227ENST00000486806 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
MCF2L-227ENST00000486806 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
MCF2L-227ENST00000486806 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
MCF2L-227ENST00000486806 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
MCF2L-227ENST00000486806 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
MCF2L-227ENST00000486806 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
MCF2L-227ENST00000486806 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
MCF2L-227ENST00000486806 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
MCF2L-227ENST00000486806 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
MCF2L-227ENST00000486806 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
MCF2L-227ENST00000486806 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
MCF2L-227ENST00000486806 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
MCF2L-227ENST00000486806 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
MCF2L-227ENST00000486806 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
MCF2L-227ENST00000486806 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
MCF2L-227ENST00000486806 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
MCF2L-227ENST00000486806 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
MCF2L-227ENST00000486806 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
MCF2L-227ENST00000486806 MT1AP04731 61 aa2.92□□□□□ -1.94
MCF2L-227ENST00000486806 KRTAP4-9Q9BYQ8 210 aa2.92□□□□□ -1.94
MCF2L-227ENST00000486806 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
MCF2L-227ENST00000486806 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
MCF2L-227ENST00000486806 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
MCF2L-227ENST00000486806 MT4P47944 62 aa2.9□□□□□ -1.95
MCF2L-227ENST00000486806 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
MCF2L-227ENST00000486806 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
MCF2L-227ENST00000486806 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
MCF2L-227ENST00000486806 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
MCF2L-227ENST00000486806 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
MCF2L-227ENST00000486806 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
MCF2L-227ENST00000486806 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
MCF2L-227ENST00000486806 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
MCF2L-227ENST00000486806 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
MCF2L-227ENST00000486806 MT3P25713 68 aa2.64□□□□□ -1.99
MCF2L-227ENST00000486806 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
MCF2L-227ENST00000486806 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
MCF2L-227ENST00000486806 NDUFAF8A1L188 74 aa2.57□□□□□ -2
MCF2L-227ENST00000486806 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
MCF2L-227ENST00000486806 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
MCF2L-227ENST00000486806 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
MCF2L-227ENST00000486806 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
MCF2L-227ENST00000486806 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
MCF2L-227ENST00000486806 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
MCF2L-227ENST00000486806 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
MCF2L-227ENST00000486806 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
MCF2L-227ENST00000486806 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
MCF2L-227ENST00000486806 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
MCF2L-227ENST00000486806 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
MCF2L-227ENST00000486806 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
MCF2L-227ENST00000486806 INE1O15225 51 aa2.12□□□□□ -2.07
MCF2L-227ENST00000486806 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
MCF2L-227ENST00000486806 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
MCF2L-227ENST00000486806 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
MCF2L-227ENST00000486806 PRM1P04553 51 aa1.92□□□□□ -2.1
MCF2L-227ENST00000486806 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
MCF2L-227ENST00000486806 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
MCF2L-227ENST00000486806 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
MCF2L-227ENST00000486806 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
MCF2L-227ENST00000486806 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
MCF2L-227ENST00000486806 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
MCF2L-227ENST00000486806 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 132 ms