RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
PKD1-219ENST00000486339 MT1EP04732 61 aa4.58□□□□□ -1.68
PKD1-219ENST00000486339 MT1LQ93083 61 aa4.56□□□□□ -1.68
PKD1-219ENST00000486339 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
PKD1-219ENST00000486339 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
PKD1-219ENST00000486339 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
PKD1-219ENST00000486339 MT1MQ8N339 61 aa4.4□□□□□ -1.7
PKD1-219ENST00000486339 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
PKD1-219ENST00000486339 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
PKD1-219ENST00000486339 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
PKD1-219ENST00000486339 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
PKD1-219ENST00000486339 USH2AO75445 5202 aa4.22□□□□□ -1.73
PKD1-219ENST00000486339 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
PKD1-219ENST00000486339 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
PKD1-219ENST00000486339 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
PKD1-219ENST00000486339 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
PKD1-219ENST00000486339 MT4P47944 62 aa4.11□□□□□ -1.75
PKD1-219ENST00000486339 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
PKD1-219ENST00000486339 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
PKD1-219ENST00000486339 MT3P25713 68 aa4.08□□□□□ -1.76
PKD1-219ENST00000486339 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
PKD1-219ENST00000486339 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
PKD1-219ENST00000486339 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
PKD1-219ENST00000486339 MT1AP04731 61 aa4.03□□□□□ -1.76
PKD1-219ENST00000486339 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
PKD1-219ENST00000486339 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
PKD1-219ENST00000486339 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
PKD1-219ENST00000486339 KMT2DO14686 5537 aa3.97□□□□□ -1.77
PKD1-219ENST00000486339 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
PKD1-219ENST00000486339 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
PKD1-219ENST00000486339 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
PKD1-219ENST00000486339 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.78
PKD1-219ENST00000486339 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.78
PKD1-219ENST00000486339 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.78
PKD1-219ENST00000486339 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
PKD1-219ENST00000486339 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
PKD1-219ENST00000486339 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
PKD1-219ENST00000486339 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
PKD1-219ENST00000486339 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
PKD1-219ENST00000486339 PRM1P04553 51 aa3.76□□□□□ -1.81
PKD1-219ENST00000486339 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
PKD1-219ENST00000486339 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
PKD1-219ENST00000486339 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
PKD1-219ENST00000486339 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
PKD1-219ENST00000486339 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
PKD1-219ENST00000486339 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
PKD1-219ENST00000486339 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
PKD1-219ENST00000486339 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
PKD1-219ENST00000486339 NEBP20929 6669 aa3.57□□□□□ -1.84
PKD1-219ENST00000486339 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
PKD1-219ENST00000486339 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
PKD1-219ENST00000486339 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
PKD1-219ENST00000486339 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
PKD1-219ENST00000486339 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
PKD1-219ENST00000486339 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
PKD1-219ENST00000486339 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
PKD1-219ENST00000486339 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
PKD1-219ENST00000486339 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
PKD1-219ENST00000486339 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
PKD1-219ENST00000486339 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
PKD1-219ENST00000486339 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
PKD1-219ENST00000486339 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
PKD1-219ENST00000486339 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PKD1-219ENST00000486339 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
PKD1-219ENST00000486339 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PKD1-219ENST00000486339 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
PKD1-219ENST00000486339 KRTAP5-8O75690 187 aa2.54□□□□□ -2
PKD1-219ENST00000486339 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
PKD1-219ENST00000486339 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PKD1-219ENST00000486339 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
PKD1-219ENST00000486339 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
PKD1-219ENST00000486339 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
PKD1-219ENST00000486339 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
PKD1-219ENST00000486339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
PKD1-219ENST00000486339 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
PKD1-219ENST00000486339 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
PKD1-219ENST00000486339 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
PKD1-219ENST00000486339 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms