RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RPS28P62857 69 aaKnown RBP2.4□□□□□ -2.03
COPS3-208ENST00000486032 Q1T7F1 81 aa2.39□□□□□ -2.03
COPS3-208ENST00000486032 UQCR11O14957 56 aa2.38□□□□□ -2.03
COPS3-208ENST00000486032 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
COPS3-208ENST00000486032 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
COPS3-208ENST00000486032 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
COPS3-208ENST00000486032 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
COPS3-208ENST00000486032 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
COPS3-208ENST00000486032 A6NED7 52 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 KRTAP12-1P59990 96 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 KRTAP12-2P59991 146 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 MT1XP80297 61 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
COPS3-208ENST00000486032 KMT2DO14686 5537 aa2.32□□□□□ -2.04
COPS3-208ENST00000486032 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
COPS3-208ENST00000486032 NEBP20929 6669 aa2.28□□□□□ -2.04
COPS3-208ENST00000486032 K7ERS5 55 aa2.28□□□□□ -2.04
COPS3-208ENST00000486032 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
COPS3-208ENST00000486032 CDC42SE1Q9NRR8 79 aa2.24□□□□□ -2.05
COPS3-208ENST00000486032 C10orf95Q9H7T3 257 aa2.23□□□□□ -2.05
COPS3-208ENST00000486032 BRK1Q8WUW1 75 aa2.21□□□□□ -2.06
COPS3-208ENST00000486032 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
COPS3-208ENST00000486032 TNP1P09430 55 aa2.2□□□□□ -2.06
COPS3-208ENST00000486032 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
COPS3-208ENST00000486032 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
COPS3-208ENST00000486032 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
COPS3-208ENST00000486032 ROMO1P60602 79 aa2.14□□□□□ -2.07
COPS3-208ENST00000486032 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
COPS3-208ENST00000486032 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
COPS3-208ENST00000486032 SPRR2EP22531 72 aa2.11□□□□□ -2.07
COPS3-208ENST00000486032 SPRR2BP35325 72 aa2.11□□□□□ -2.07
COPS3-208ENST00000486032 SPRR2AP35326 72 aa2.11□□□□□ -2.07
COPS3-208ENST00000486032 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
COPS3-208ENST00000486032 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.07
COPS3-208ENST00000486032 KRTAP19-7Q3SYF9 63 aa2.08□□□□□ -2.08
COPS3-208ENST00000486032 PMAIP1Q13794 54 aa2.07□□□□□ -2.08
COPS3-208ENST00000486032 MT1EP04732 61 aa2.06□□□□□ -2.08
COPS3-208ENST00000486032 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
COPS3-208ENST00000486032 SPRR2DP22532 72 aa2.03□□□□□ -2.08
COPS3-208ENST00000486032 PRO0628Q9UI54 55 aa2.03□□□□□ -2.08
COPS3-208ENST00000486032 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
COPS3-208ENST00000486032 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
COPS3-208ENST00000486032 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
COPS3-208ENST00000486032 PP632Q6XCG6 107 aa2.01□□□□□ -2.09
COPS3-208ENST00000486032 MT1LQ93083 61 aa2□□□□□ -2.09
COPS3-208ENST00000486032 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
COPS3-208ENST00000486032 PRAC1Q96KF2 57 aa1.98□□□□□ -2.09
COPS3-208ENST00000486032 MT1GP13640 62 aa1.97□□□□□ -2.09
COPS3-208ENST00000486032 MT1MQ8N339 61 aa1.96□□□□□ -2.1
COPS3-208ENST00000486032 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
COPS3-208ENST00000486032 DSTQ03001 7570 aaKnown RBP1.94□□□□□ -2.1
COPS3-208ENST00000486032 NDUFAF8A1L188 74 aa1.93□□□□□ -2.1
COPS3-208ENST00000486032 KTN1-AS1Q86SY8 53 aa1.91□□□□□ -2.1
COPS3-208ENST00000486032 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
COPS3-208ENST00000486032 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
COPS3-208ENST00000486032 MT4P47944 62 aa1.81□□□□□ -2.12
COPS3-208ENST00000486032 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
COPS3-208ENST00000486032 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
COPS3-208ENST00000486032 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
COPS3-208ENST00000486032 MT1AP04731 61 aa1.7□□□□□ -2.14
COPS3-208ENST00000486032 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
COPS3-208ENST00000486032 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
COPS3-208ENST00000486032 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
COPS3-208ENST00000486032 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
COPS3-208ENST00000486032 SPRR5A0A1B0GTR4 108 aa1.69□□□□□ -2.14
COPS3-208ENST00000486032 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
COPS3-208ENST00000486032 LUZP6Q538Z0 58 aa1.63□□□□□ -2.15
COPS3-208ENST00000486032 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
COPS3-208ENST00000486032 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
COPS3-208ENST00000486032 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
COPS3-208ENST00000486032 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
COPS3-208ENST00000486032 INE1O15225 51 aa1.3□□□□□ -2.2
COPS3-208ENST00000486032 PRM1P04553 51 aa1.12□□□□□ -2.23
COPS3-208ENST00000486032 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
COPS3-208ENST00000486032 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
COPS3-208ENST00000486032 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 158.1 ms