RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SPRR2AP35326 72 aa4.4□□□□□ -1.71
SND1-212ENST00000485871 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
SND1-212ENST00000485871 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
SND1-212ENST00000485871 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
SND1-212ENST00000485871 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
SND1-212ENST00000485871 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
SND1-212ENST00000485871 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
SND1-212ENST00000485871 SPRR2DP22532 72 aa4.26□□□□□ -1.73
SND1-212ENST00000485871 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
SND1-212ENST00000485871 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
SND1-212ENST00000485871 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
SND1-212ENST00000485871 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
SND1-212ENST00000485871 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
SND1-212ENST00000485871 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
SND1-212ENST00000485871 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
SND1-212ENST00000485871 MT1EP04732 61 aa4.16□□□□□ -1.74
SND1-212ENST00000485871 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
SND1-212ENST00000485871 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
SND1-212ENST00000485871 MT1LQ93083 61 aa4.05□□□□□ -1.76
SND1-212ENST00000485871 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
SND1-212ENST00000485871 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
SND1-212ENST00000485871 H3BS24 57 aa4□□□□□ -1.77
SND1-212ENST00000485871 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
SND1-212ENST00000485871 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
SND1-212ENST00000485871 MT1GP13640 62 aa3.96□□□□□ -1.78
SND1-212ENST00000485871 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SND1-212ENST00000485871 MT1MQ8N339 61 aa3.93□□□□□ -1.78
SND1-212ENST00000485871 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
SND1-212ENST00000485871 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
SND1-212ENST00000485871 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
SND1-212ENST00000485871 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
SND1-212ENST00000485871 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
SND1-212ENST00000485871 MT4P47944 62 aa3.77□□□□□ -1.81
SND1-212ENST00000485871 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
SND1-212ENST00000485871 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
SND1-212ENST00000485871 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
SND1-212ENST00000485871 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
SND1-212ENST00000485871 KRTAP5-7Q6L8G8 165 aa3.71□□□□□ -1.82
SND1-212ENST00000485871 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
SND1-212ENST00000485871 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
SND1-212ENST00000485871 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
SND1-212ENST00000485871 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
SND1-212ENST00000485871 INE1O15225 51 aa3.56□□□□□ -1.84
SND1-212ENST00000485871 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
SND1-212ENST00000485871 MT1AP04731 61 aa3.45□□□□□ -1.86
SND1-212ENST00000485871 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
SND1-212ENST00000485871 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
SND1-212ENST00000485871 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
SND1-212ENST00000485871 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
SND1-212ENST00000485871 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
SND1-212ENST00000485871 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SND1-212ENST00000485871 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
SND1-212ENST00000485871 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
SND1-212ENST00000485871 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
SND1-212ENST00000485871 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
SND1-212ENST00000485871 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
SND1-212ENST00000485871 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
SND1-212ENST00000485871 MT3P25713 68 aa3.1□□□□□ -1.91
SND1-212ENST00000485871 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
SND1-212ENST00000485871 KRTAP9-9Q9BYP9 154 aa3.07□□□□□ -1.92
SND1-212ENST00000485871 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SND1-212ENST00000485871 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
SND1-212ENST00000485871 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
SND1-212ENST00000485871 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SND1-212ENST00000485871 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
SND1-212ENST00000485871 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
SND1-212ENST00000485871 PRM1P04553 51 aa2.62□□□□□ -1.99
SND1-212ENST00000485871 LCE1CQ5T751 118 aa2.57□□□□□ -2
SND1-212ENST00000485871 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
SND1-212ENST00000485871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SND1-212ENST00000485871 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
SND1-212ENST00000485871 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SND1-212ENST00000485871 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SND1-212ENST00000485871 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
SND1-212ENST00000485871 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SND1-212ENST00000485871 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SND1-212ENST00000485871 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
SND1-212ENST00000485871 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 250.9 ms