RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SPRR2AP35326 72 aa5.71□□□□□ -1.5
APOE-205ENST00000485628 NEBP20929 6669 aa5.7□□□□□ -1.5
APOE-205ENST00000485628 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
APOE-205ENST00000485628 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
APOE-205ENST00000485628 MT1LQ93083 61 aa5.67□□□□□ -1.5
APOE-205ENST00000485628 MT1GP13640 62 aa5.62□□□□□ -1.51
APOE-205ENST00000485628 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
APOE-205ENST00000485628 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
APOE-205ENST00000485628 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
APOE-205ENST00000485628 MT1MQ8N339 61 aa5.52□□□□□ -1.53
APOE-205ENST00000485628 SPRR2DP22532 72 aa5.51□□□□□ -1.53
APOE-205ENST00000485628 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
APOE-205ENST00000485628 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
APOE-205ENST00000485628 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
APOE-205ENST00000485628 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
APOE-205ENST00000485628 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
APOE-205ENST00000485628 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
APOE-205ENST00000485628 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
APOE-205ENST00000485628 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
APOE-205ENST00000485628 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
APOE-205ENST00000485628 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
APOE-205ENST00000485628 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
APOE-205ENST00000485628 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
APOE-205ENST00000485628 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
APOE-205ENST00000485628 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
APOE-205ENST00000485628 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
APOE-205ENST00000485628 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
APOE-205ENST00000485628 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
APOE-205ENST00000485628 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
APOE-205ENST00000485628 MT1AP04731 61 aa4.83□□□□□ -1.64
APOE-205ENST00000485628 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
APOE-205ENST00000485628 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
APOE-205ENST00000485628 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
APOE-205ENST00000485628 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
APOE-205ENST00000485628 MT4P47944 62 aa4.76□□□□□ -1.65
APOE-205ENST00000485628 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
APOE-205ENST00000485628 H3BS24 57 aa4.7□□□□□ -1.66
APOE-205ENST00000485628 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
APOE-205ENST00000485628 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
APOE-205ENST00000485628 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
APOE-205ENST00000485628 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
APOE-205ENST00000485628 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
APOE-205ENST00000485628 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
APOE-205ENST00000485628 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
APOE-205ENST00000485628 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
APOE-205ENST00000485628 MT3P25713 68 aa4.37□□□□□ -1.71
APOE-205ENST00000485628 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
APOE-205ENST00000485628 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
APOE-205ENST00000485628 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
APOE-205ENST00000485628 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
APOE-205ENST00000485628 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
APOE-205ENST00000485628 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
APOE-205ENST00000485628 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
APOE-205ENST00000485628 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
APOE-205ENST00000485628 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
APOE-205ENST00000485628 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
APOE-205ENST00000485628 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
APOE-205ENST00000485628 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
APOE-205ENST00000485628 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
APOE-205ENST00000485628 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
APOE-205ENST00000485628 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
APOE-205ENST00000485628 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
APOE-205ENST00000485628 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
APOE-205ENST00000485628 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
APOE-205ENST00000485628 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
APOE-205ENST00000485628 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
APOE-205ENST00000485628 INE1O15225 51 aa3.44□□□□□ -1.86
APOE-205ENST00000485628 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
APOE-205ENST00000485628 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
APOE-205ENST00000485628 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
APOE-205ENST00000485628 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
APOE-205ENST00000485628 PRM1P04553 51 aa3.11□□□□□ -1.91
APOE-205ENST00000485628 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
APOE-205ENST00000485628 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
APOE-205ENST00000485628 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
APOE-205ENST00000485628 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
APOE-205ENST00000485628 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
APOE-205ENST00000485628 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms