RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 MT1XP80297 61 aa3.44□□□□□ -1.86
TMEM248-206ENST00000484751 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
TMEM248-206ENST00000484751 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
TMEM248-206ENST00000484751 FAT4Q6V0I7 4981 aa3.39□□□□□ -1.87
TMEM248-206ENST00000484751 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TMEM248-206ENST00000484751 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
TMEM248-206ENST00000484751 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
TMEM248-206ENST00000484751 INE1O15225 51 aa3.24□□□□□ -1.89
TMEM248-206ENST00000484751 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
TMEM248-206ENST00000484751 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
TMEM248-206ENST00000484751 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.91
TMEM248-206ENST00000484751 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
TMEM248-206ENST00000484751 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
TMEM248-206ENST00000484751 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
TMEM248-206ENST00000484751 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
TMEM248-206ENST00000484751 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
TMEM248-206ENST00000484751 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
TMEM248-206ENST00000484751 MT1EP04732 61 aa3.01□□□□□ -1.93
TMEM248-206ENST00000484751 MT1LQ93083 61 aa3.01□□□□□ -1.93
TMEM248-206ENST00000484751 USH2AO75445 5202 aa2.94□□□□□ -1.94
TMEM248-206ENST00000484751 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
TMEM248-206ENST00000484751 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
TMEM248-206ENST00000484751 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
TMEM248-206ENST00000484751 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
TMEM248-206ENST00000484751 SSPOA2VEC9 5147 aa2.9□□□□□ -1.95
TMEM248-206ENST00000484751 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
TMEM248-206ENST00000484751 MT1GP13640 62 aa2.87□□□□□ -1.95
TMEM248-206ENST00000484751 KRTAP19-3Q7Z4W3 81 aa2.85□□□□□ -1.95
TMEM248-206ENST00000484751 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
TMEM248-206ENST00000484751 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
TMEM248-206ENST00000484751 MT1MQ8N339 61 aa2.81□□□□□ -1.96
TMEM248-206ENST00000484751 KMT2DO14686 5537 aa2.78□□□□□ -1.96
TMEM248-206ENST00000484751 NEBP20929 6669 aa2.76□□□□□ -1.97
TMEM248-206ENST00000484751 SPRR2FQ96RM1 72 aa2.73□□□□□ -1.97
TMEM248-206ENST00000484751 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
TMEM248-206ENST00000484751 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
TMEM248-206ENST00000484751 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
TMEM248-206ENST00000484751 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
TMEM248-206ENST00000484751 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
TMEM248-206ENST00000484751 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
TMEM248-206ENST00000484751 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
TMEM248-206ENST00000484751 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
TMEM248-206ENST00000484751 MT1AP04731 61 aa2.59□□□□□ -1.99
TMEM248-206ENST00000484751 GPR98Q8WXG9 6306 aa2.59□□□□□ -2
TMEM248-206ENST00000484751 KRTAP12-4P60329 112 aa2.58□□□□□ -2
TMEM248-206ENST00000484751 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
TMEM248-206ENST00000484751 SPRR2EP22531 72 aa2.51□□□□□ -2.01
TMEM248-206ENST00000484751 SPRR2BP35325 72 aa2.51□□□□□ -2.01
TMEM248-206ENST00000484751 SPRR2AP35326 72 aa2.51□□□□□ -2.01
TMEM248-206ENST00000484751 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
TMEM248-206ENST00000484751 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
TMEM248-206ENST00000484751 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
TMEM248-206ENST00000484751 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
TMEM248-206ENST00000484751 SPRR2DP22532 72 aa2.43□□□□□ -2.02
TMEM248-206ENST00000484751 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
TMEM248-206ENST00000484751 MT3P25713 68 aa2.35□□□□□ -2.03
TMEM248-206ENST00000484751 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
TMEM248-206ENST00000484751 SYNE1Q8NF91 8797 aaKnown RBP2.27□□□□□ -2.05
TMEM248-206ENST00000484751 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
TMEM248-206ENST00000484751 PRM1P04553 51 aa2.26□□□□□ -2.05
TMEM248-206ENST00000484751 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
TMEM248-206ENST00000484751 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
TMEM248-206ENST00000484751 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
TMEM248-206ENST00000484751 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
TMEM248-206ENST00000484751 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
TMEM248-206ENST00000484751 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
TMEM248-206ENST00000484751 MT4P47944 62 aa2.05□□□□□ -2.08
TMEM248-206ENST00000484751 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
TMEM248-206ENST00000484751 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
TMEM248-206ENST00000484751 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
TMEM248-206ENST00000484751 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
TMEM248-206ENST00000484751 LCE1CQ5T751 118 aa1.81□□□□□ -2.12
TMEM248-206ENST00000484751 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
TMEM248-206ENST00000484751 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
TMEM248-206ENST00000484751 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
TMEM248-206ENST00000484751 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TMEM248-206ENST00000484751 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
TMEM248-206ENST00000484751 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 104.8 ms