RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 A0A1B0GVX0 72 aa4□□□□□ -1.77
DDX39B-221ENST00000484566 SPRR2EP22531 72 aa3.94□□□□□ -1.78
DDX39B-221ENST00000484566 SPRR2BP35325 72 aa3.94□□□□□ -1.78
DDX39B-221ENST00000484566 SPRR2AP35326 72 aa3.94□□□□□ -1.78
DDX39B-221ENST00000484566 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
DDX39B-221ENST00000484566 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
DDX39B-221ENST00000484566 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
DDX39B-221ENST00000484566 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
DDX39B-221ENST00000484566 H1FX-AS1Q4G0G2 97 aa3.89□□□□□ -1.79
DDX39B-221ENST00000484566 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
DDX39B-221ENST00000484566 A0A1B0GU33 70 aa3.86□□□□□ -1.79
DDX39B-221ENST00000484566 MT1BP07438 61 aa3.86□□□□□ -1.79
DDX39B-221ENST00000484566 H0YAA0 97 aa3.85□□□□□ -1.79
DDX39B-221ENST00000484566 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
DDX39B-221ENST00000484566 SPRR2DP22532 72 aa3.82□□□□□ -1.8
DDX39B-221ENST00000484566 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
DDX39B-221ENST00000484566 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
DDX39B-221ENST00000484566 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
DDX39B-221ENST00000484566 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
DDX39B-221ENST00000484566 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
DDX39B-221ENST00000484566 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
DDX39B-221ENST00000484566 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
DDX39B-221ENST00000484566 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
DDX39B-221ENST00000484566 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
DDX39B-221ENST00000484566 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
DDX39B-221ENST00000484566 S4R3F8 94 aa3.69□□□□□ -1.82
DDX39B-221ENST00000484566 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
DDX39B-221ENST00000484566 KRTAP8-1Q8IUC2 63 aa3.67□□□□□ -1.82
DDX39B-221ENST00000484566 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
DDX39B-221ENST00000484566 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
DDX39B-221ENST00000484566 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
DDX39B-221ENST00000484566 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
DDX39B-221ENST00000484566 MT1XP80297 61 aa3.54□□□□□ -1.84
DDX39B-221ENST00000484566 A0A0D9SG42 100 aa3.45□□□□□ -1.86
DDX39B-221ENST00000484566 INE1O15225 51 aa3.45□□□□□ -1.86
DDX39B-221ENST00000484566 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
DDX39B-221ENST00000484566 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
DDX39B-221ENST00000484566 MT4P47944 62 aa3.41□□□□□ -1.86
DDX39B-221ENST00000484566 M0QZ58 72 aa3.38□□□□□ -1.87
DDX39B-221ENST00000484566 R4GN34 69 aa3.38□□□□□ -1.87
DDX39B-221ENST00000484566 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
DDX39B-221ENST00000484566 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
DDX39B-221ENST00000484566 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
DDX39B-221ENST00000484566 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
DDX39B-221ENST00000484566 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
DDX39B-221ENST00000484566 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
DDX39B-221ENST00000484566 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
DDX39B-221ENST00000484566 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
DDX39B-221ENST00000484566 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
DDX39B-221ENST00000484566 MT1EP04732 61 aa3.17□□□□□ -1.9
DDX39B-221ENST00000484566 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
DDX39B-221ENST00000484566 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
DDX39B-221ENST00000484566 MT1GP13640 62 aa3.1□□□□□ -1.91
DDX39B-221ENST00000484566 MT1MQ8N339 61 aa3.05□□□□□ -1.92
DDX39B-221ENST00000484566 TNP1P09430 55 aa3.02□□□□□ -1.93
DDX39B-221ENST00000484566 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
DDX39B-221ENST00000484566 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
DDX39B-221ENST00000484566 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
DDX39B-221ENST00000484566 MT1LQ93083 61 aa2.98□□□□□ -1.93
DDX39B-221ENST00000484566 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
DDX39B-221ENST00000484566 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
DDX39B-221ENST00000484566 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
DDX39B-221ENST00000484566 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
DDX39B-221ENST00000484566 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
DDX39B-221ENST00000484566 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
DDX39B-221ENST00000484566 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
DDX39B-221ENST00000484566 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
DDX39B-221ENST00000484566 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
DDX39B-221ENST00000484566 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
DDX39B-221ENST00000484566 MT1AP04731 61 aa2.54□□□□□ -2
DDX39B-221ENST00000484566 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
DDX39B-221ENST00000484566 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
DDX39B-221ENST00000484566 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
DDX39B-221ENST00000484566 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
DDX39B-221ENST00000484566 PRM1P04553 51 aa2.05□□□□□ -2.08
DDX39B-221ENST00000484566 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
DDX39B-221ENST00000484566 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
DDX39B-221ENST00000484566 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms