RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
CDC42SE1-204ENST00000483763 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
CDC42SE1-204ENST00000483763 MUC12Q9UKN1 5478 aa3.43□□□□□ -1.86
CDC42SE1-204ENST00000483763 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
CDC42SE1-204ENST00000483763 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
CDC42SE1-204ENST00000483763 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
CDC42SE1-204ENST00000483763 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
CDC42SE1-204ENST00000483763 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
CDC42SE1-204ENST00000483763 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
CDC42SE1-204ENST00000483763 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
CDC42SE1-204ENST00000483763 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
CDC42SE1-204ENST00000483763 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
CDC42SE1-204ENST00000483763 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
CDC42SE1-204ENST00000483763 NEBP20929 6669 aa3.32□□□□□ -1.88
CDC42SE1-204ENST00000483763 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
CDC42SE1-204ENST00000483763 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
CDC42SE1-204ENST00000483763 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
CDC42SE1-204ENST00000483763 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
CDC42SE1-204ENST00000483763 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
CDC42SE1-204ENST00000483763 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
CDC42SE1-204ENST00000483763 MT1EP04732 61 aa3.17□□□□□ -1.9
CDC42SE1-204ENST00000483763 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CDC42SE1-204ENST00000483763 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
CDC42SE1-204ENST00000483763 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
CDC42SE1-204ENST00000483763 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
CDC42SE1-204ENST00000483763 MT1LQ93083 61 aa3.12□□□□□ -1.91
CDC42SE1-204ENST00000483763 SPRR2EP22531 72 aa3.11□□□□□ -1.91
CDC42SE1-204ENST00000483763 SPRR2BP35325 72 aa3.11□□□□□ -1.91
CDC42SE1-204ENST00000483763 SPRR2AP35326 72 aa3.11□□□□□ -1.91
CDC42SE1-204ENST00000483763 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
CDC42SE1-204ENST00000483763 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
CDC42SE1-204ENST00000483763 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
CDC42SE1-204ENST00000483763 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
CDC42SE1-204ENST00000483763 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
CDC42SE1-204ENST00000483763 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
CDC42SE1-204ENST00000483763 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
CDC42SE1-204ENST00000483763 SPRR2DP22532 72 aa2.99□□□□□ -1.93
CDC42SE1-204ENST00000483763 MT1MQ8N339 61 aa2.98□□□□□ -1.93
CDC42SE1-204ENST00000483763 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
CDC42SE1-204ENST00000483763 MT1GP13640 62 aa2.97□□□□□ -1.93
CDC42SE1-204ENST00000483763 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
CDC42SE1-204ENST00000483763 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
CDC42SE1-204ENST00000483763 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
CDC42SE1-204ENST00000483763 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
CDC42SE1-204ENST00000483763 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
CDC42SE1-204ENST00000483763 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
CDC42SE1-204ENST00000483763 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
CDC42SE1-204ENST00000483763 MT4P47944 62 aa2.7□□□□□ -1.98
CDC42SE1-204ENST00000483763 MT3P25713 68 aa2.69□□□□□ -1.98
CDC42SE1-204ENST00000483763 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
CDC42SE1-204ENST00000483763 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
CDC42SE1-204ENST00000483763 MT1AP04731 61 aa2.61□□□□□ -1.99
CDC42SE1-204ENST00000483763 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
CDC42SE1-204ENST00000483763 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
CDC42SE1-204ENST00000483763 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
CDC42SE1-204ENST00000483763 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
CDC42SE1-204ENST00000483763 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CDC42SE1-204ENST00000483763 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
CDC42SE1-204ENST00000483763 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
CDC42SE1-204ENST00000483763 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
CDC42SE1-204ENST00000483763 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
CDC42SE1-204ENST00000483763 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
CDC42SE1-204ENST00000483763 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.05
CDC42SE1-204ENST00000483763 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
CDC42SE1-204ENST00000483763 PRM1P04553 51 aa2.24□□□□□ -2.05
CDC42SE1-204ENST00000483763 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CDC42SE1-204ENST00000483763 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
CDC42SE1-204ENST00000483763 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
CDC42SE1-204ENST00000483763 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
CDC42SE1-204ENST00000483763 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
CDC42SE1-204ENST00000483763 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.09
CDC42SE1-204ENST00000483763 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CDC42SE1-204ENST00000483763 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
CDC42SE1-204ENST00000483763 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
CDC42SE1-204ENST00000483763 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CDC42SE1-204ENST00000483763 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CDC42SE1-204ENST00000483763 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
CDC42SE1-204ENST00000483763 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 142.4 ms