RNA–Protein interactions for RNA: ENST00000483713.5

POLR2F-209, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3

Gene POLR2F, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-209ENST00000483713 SPRR2AP35326 72 aa5.75□□□□□ -1.49
POLR2F-209ENST00000483713 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
POLR2F-209ENST00000483713 KTN1-AS1Q86SY8 53 aa5.73□□□□□ -1.49
POLR2F-209ENST00000483713 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
POLR2F-209ENST00000483713 MT1LQ93083 61 aa5.67□□□□□ -1.5
POLR2F-209ENST00000483713 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
POLR2F-209ENST00000483713 MT1GP13640 62 aa5.63□□□□□ -1.51
POLR2F-209ENST00000483713 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
POLR2F-209ENST00000483713 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
POLR2F-209ENST00000483713 KRTAP20-1Q3LI63 56 aa5.6□□□□□ -1.51
POLR2F-209ENST00000483713 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
POLR2F-209ENST00000483713 KRTAP2-3P0C7H8 128 aa5.56□□□□□ -1.52
POLR2F-209ENST00000483713 SPRR2DP22532 72 aa5.56□□□□□ -1.52
POLR2F-209ENST00000483713 KRTAP2-4Q9BYR9 128 aa5.56□□□□□ -1.52
POLR2F-209ENST00000483713 MT1MQ8N339 61 aa5.52□□□□□ -1.53
POLR2F-209ENST00000483713 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
POLR2F-209ENST00000483713 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
POLR2F-209ENST00000483713 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
POLR2F-209ENST00000483713 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
POLR2F-209ENST00000483713 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
POLR2F-209ENST00000483713 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
POLR2F-209ENST00000483713 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
POLR2F-209ENST00000483713 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
POLR2F-209ENST00000483713 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
POLR2F-209ENST00000483713 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
POLR2F-209ENST00000483713 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
POLR2F-209ENST00000483713 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
POLR2F-209ENST00000483713 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
POLR2F-209ENST00000483713 KRTAP5-4Q6L8H1 288 aa4.96□□□□□ -1.62
POLR2F-209ENST00000483713 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
POLR2F-209ENST00000483713 MT1AP04731 61 aa4.85□□□□□ -1.63
POLR2F-209ENST00000483713 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
POLR2F-209ENST00000483713 MT4P47944 62 aa4.81□□□□□ -1.64
POLR2F-209ENST00000483713 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
POLR2F-209ENST00000483713 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
POLR2F-209ENST00000483713 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
POLR2F-209ENST00000483713 HMCN1Q96RW7 5635 aa4.73□□□□□ -1.65
POLR2F-209ENST00000483713 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
POLR2F-209ENST00000483713 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
POLR2F-209ENST00000483713 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
POLR2F-209ENST00000483713 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
POLR2F-209ENST00000483713 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.68
POLR2F-209ENST00000483713 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
POLR2F-209ENST00000483713 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
POLR2F-209ENST00000483713 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
POLR2F-209ENST00000483713 MT3P25713 68 aa4.41□□□□□ -1.7
POLR2F-209ENST00000483713 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
POLR2F-209ENST00000483713 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
POLR2F-209ENST00000483713 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
POLR2F-209ENST00000483713 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
POLR2F-209ENST00000483713 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
POLR2F-209ENST00000483713 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
POLR2F-209ENST00000483713 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
POLR2F-209ENST00000483713 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
POLR2F-209ENST00000483713 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
POLR2F-209ENST00000483713 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
POLR2F-209ENST00000483713 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
POLR2F-209ENST00000483713 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
POLR2F-209ENST00000483713 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
POLR2F-209ENST00000483713 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
POLR2F-209ENST00000483713 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
POLR2F-209ENST00000483713 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
POLR2F-209ENST00000483713 INE1O15225 51 aa3.64□□□□□ -1.83
POLR2F-209ENST00000483713 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
POLR2F-209ENST00000483713 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
POLR2F-209ENST00000483713 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
POLR2F-209ENST00000483713 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
POLR2F-209ENST00000483713 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
POLR2F-209ENST00000483713 PRM1P04553 51 aa3.2□□□□□ -1.9
POLR2F-209ENST00000483713 H3BS24 57 aa3.17□□□□□ -1.9
POLR2F-209ENST00000483713 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
POLR2F-209ENST00000483713 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
POLR2F-209ENST00000483713 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
POLR2F-209ENST00000483713 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
POLR2F-209ENST00000483713 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
POLR2F-209ENST00000483713 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
POLR2F-209ENST00000483713 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
POLR2F-209ENST00000483713 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms