RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 HYDINQ4G0P3 5121 aa1.02□□□□□ -2.25
MSL3-216ENST00000483645 RPS29P62273 56 aaKnown RBP1.02□□□□□ -2.25
MSL3-216ENST00000483645 M0QZ58 72 aa1□□□□□ -2.25
MSL3-216ENST00000483645 KMT2CQ8NEZ4 4911 aaKnown RBP0.99□□□□□ -2.25
MSL3-216ENST00000483645 RYR2Q92736 4967 aa0.99□□□□□ -2.25
MSL3-216ENST00000483645 RYR3Q15413 4870 aa0.99□□□□□ -2.25
MSL3-216ENST00000483645 UBE2DNLQ8IWF7 75 aa0.98□□□□□ -2.25
MSL3-216ENST00000483645 LRP2P98164 4655 aa0.98□□□□□ -2.25
MSL3-216ENST00000483645 Q5VSD8 79 aa0.97□□□□□ -2.25
MSL3-216ENST00000483645 RYR1P21817 5038 aa0.96□□□□□ -2.26
MSL3-216ENST00000483645 C9orf92A6NGG3 77 aa0.96□□□□□ -2.26
MSL3-216ENST00000483645 KRTAP10-4P60372 401 aaPredicted RBP0.96□□□□□ -2.26
MSL3-216ENST00000483645 KRTAP5-10Q6L8G5 202 aa0.95□□□□□ -2.26
MSL3-216ENST00000483645 BIRC6Q9NR09 4857 aa0.94□□□□□ -2.26
MSL3-216ENST00000483645 HERC2O95714 4834 aa0.94□□□□□ -2.26
MSL3-216ENST00000483645 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
MSL3-216ENST00000483645 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
MSL3-216ENST00000483645 PCLOQ9Y6V0 5065 aa0.9□□□□□ -2.27
MSL3-216ENST00000483645 KRTAP2-3P0C7H8 128 aa0.89□□□□□ -2.27
MSL3-216ENST00000483645 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
MSL3-216ENST00000483645 KRTAP2-4Q9BYR9 128 aa0.89□□□□□ -2.27
MSL3-216ENST00000483645 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
MSL3-216ENST00000483645 TNP1P09430 55 aa0.87□□□□□ -2.27
MSL3-216ENST00000483645 ABCA13Q86UQ4 5058 aa0.86□□□□□ -2.27
MSL3-216ENST00000483645 HMCN2Q8NDA2 5059 aa0.86□□□□□ -2.27
MSL3-216ENST00000483645 UBR4Q5T4S7 5183 aa0.85□□□□□ -2.27
MSL3-216ENST00000483645 MUC2Q02817 5179 aa0.85□□□□□ -2.27
MSL3-216ENST00000483645 EPPK1P58107 5090 aaKnown RBP0.83□□□□□ -2.28
MSL3-216ENST00000483645 SMR3BP02814 79 aaPredicted RBP0.83□□□□□ -2.28
MSL3-216ENST00000483645 KIAA1109Q2LD37 5005 aa0.83□□□□□ -2.28
MSL3-216ENST00000483645 MT1HL1P0DM35 61 aa0.81□□□□□ -2.28
MSL3-216ENST00000483645 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
MSL3-216ENST00000483645 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
MSL3-216ENST00000483645 MT1XP80297 61 aa0.78□□□□□ -2.28
MSL3-216ENST00000483645 FAT4Q6V0I7 4981 aa0.77□□□□□ -2.29
MSL3-216ENST00000483645 RNF213Q63HN8 5207 aa0.76□□□□□ -2.29
MSL3-216ENST00000483645 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
MSL3-216ENST00000483645 MT1BP07438 61 aa0.75□□□□□ -2.29
MSL3-216ENST00000483645 USH2AO75445 5202 aa0.72□□□□□ -2.29
MSL3-216ENST00000483645 SYNE1Q8NF91 8797 aaKnown RBP0.72□□□□□ -2.29
MSL3-216ENST00000483645 MT1FP04733 61 aa0.71□□□□□ -2.3
MSL3-216ENST00000483645 M0R2T5 61 aa0.7□□□□□ -2.3
MSL3-216ENST00000483645 MT2AP02795 61 aa0.7□□□□□ -2.3
MSL3-216ENST00000483645 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
MSL3-216ENST00000483645 SSPOA2VEC9 5147 aa0.7□□□□□ -2.3
MSL3-216ENST00000483645 PRM1P04553 51 aa0.69□□□□□ -2.3
MSL3-216ENST00000483645 KMT2DO14686 5537 aa0.68□□□□□ -2.3
MSL3-216ENST00000483645 MT1LQ93083 61 aa0.68□□□□□ -2.3
MSL3-216ENST00000483645 MT1EP04732 61 aa0.66□□□□□ -2.3
MSL3-216ENST00000483645 MT1AP04731 61 aa0.65□□□□□ -2.31
MSL3-216ENST00000483645 MT1HP80294 61 aa0.63□□□□□ -2.31
MSL3-216ENST00000483645 KRTAP6-2Q3LI66 62 aa0.63□□□□□ -2.31
MSL3-216ENST00000483645 MDN1Q9NU22 5596 aa0.63□□□□□ -2.31
MSL3-216ENST00000483645 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
MSL3-216ENST00000483645 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
MSL3-216ENST00000483645 MT1GP13640 62 aa0.59□□□□□ -2.31
MSL3-216ENST00000483645 MT1MQ8N339 61 aa0.59□□□□□ -2.31
MSL3-216ENST00000483645 SPRR2FQ96RM1 72 aa0.59□□□□□ -2.31
MSL3-216ENST00000483645 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
MSL3-216ENST00000483645 GPR98Q8WXG9 6306 aa0.56□□□□□ -2.32
MSL3-216ENST00000483645 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
MSL3-216ENST00000483645 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
MSL3-216ENST00000483645 SPRR2EP22531 72 aa0.54□□□□□ -2.32
MSL3-216ENST00000483645 SPRR2AP35326 72 aa0.54□□□□□ -2.32
MSL3-216ENST00000483645 SPRR2DP22532 72 aa0.53□□□□□ -2.32
MSL3-216ENST00000483645 SPRR2BP35325 72 aa0.53□□□□□ -2.32
MSL3-216ENST00000483645 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
MSL3-216ENST00000483645 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
MSL3-216ENST00000483645 KRTAP19-6Q3LI70 58 aa0.45□□□□□ -2.34
MSL3-216ENST00000483645 DSTQ03001 7570 aaKnown RBP0.43□□□□□ -2.34
MSL3-216ENST00000483645 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
MSL3-216ENST00000483645 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
MSL3-216ENST00000483645 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
MSL3-216ENST00000483645 KRTAP20-2Q3LI61 65 aa0.32□□□□□ -2.36
MSL3-216ENST00000483645 NEBP20929 6669 aa0.31□□□□□ -2.36
MSL3-216ENST00000483645 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
MSL3-216ENST00000483645 KRTAP20-1Q3LI63 56 aa0.25□□□□□ -2.37
MSL3-216ENST00000483645 MT4P47944 62 aa0.21□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 124 ms