RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
RXRB-204ENST00000483281 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
RXRB-204ENST00000483281 MT1EP04732 61 aa7.62□□□□□ -1.19
RXRB-204ENST00000483281 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
RXRB-204ENST00000483281 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
RXRB-204ENST00000483281 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
RXRB-204ENST00000483281 SPRR2EP22531 72 aa7.48□□□□□ -1.21
RXRB-204ENST00000483281 SPRR2BP35325 72 aa7.48□□□□□ -1.21
RXRB-204ENST00000483281 SPRR2AP35326 72 aa7.48□□□□□ -1.21
RXRB-204ENST00000483281 INE1O15225 51 aa7.45□□□□□ -1.22
RXRB-204ENST00000483281 KRTAP19-3Q7Z4W3 81 aa7.42□□□□□ -1.22
RXRB-204ENST00000483281 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
RXRB-204ENST00000483281 MT1LQ93083 61 aa7.4□□□□□ -1.22
RXRB-204ENST00000483281 LCE5AQ5TCM9 118 aa7.37□□□□□ -1.23
RXRB-204ENST00000483281 MT1GP13640 62 aa7.36□□□□□ -1.23
RXRB-204ENST00000483281 NEBP20929 6669 aa7.32□□□□□ -1.24
RXRB-204ENST00000483281 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
RXRB-204ENST00000483281 SPRR2DP22532 72 aa7.23□□□□□ -1.25
RXRB-204ENST00000483281 MT1MQ8N339 61 aa7.2□□□□□ -1.26
RXRB-204ENST00000483281 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
RXRB-204ENST00000483281 KRTAP2-3P0C7H8 128 aa7.06□□□□□ -1.28
RXRB-204ENST00000483281 KRTAP2-4Q9BYR9 128 aa7.06□□□□□ -1.28
RXRB-204ENST00000483281 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
RXRB-204ENST00000483281 KRTAP20-1Q3LI63 56 aa7.01□□□□□ -1.29
RXRB-204ENST00000483281 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
RXRB-204ENST00000483281 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
RXRB-204ENST00000483281 KRTAP2-2Q9BYT5 123 aa6.88□□□□□ -1.31
RXRB-204ENST00000483281 KRTAP2-1Q9BYU5 128 aa6.88□□□□□ -1.31
RXRB-204ENST00000483281 DSTQ03001 7570 aaKnown RBP6.86□□□□□ -1.31
RXRB-204ENST00000483281 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
RXRB-204ENST00000483281 KRTAP9-6A8MVA2 160 aa6.63□□□□□ -1.35
RXRB-204ENST00000483281 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
RXRB-204ENST00000483281 KRTAP5-4Q6L8H1 288 aa6.51□□□□□ -1.37
RXRB-204ENST00000483281 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
RXRB-204ENST00000483281 MT1AP04731 61 aa6.32□□□□□ -1.4
RXRB-204ENST00000483281 KRTAP4-9Q9BYQ8 210 aa6.29□□□□□ -1.4
RXRB-204ENST00000483281 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
RXRB-204ENST00000483281 MT4P47944 62 aa6.24□□□□□ -1.41
RXRB-204ENST00000483281 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
RXRB-204ENST00000483281 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
RXRB-204ENST00000483281 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
RXRB-204ENST00000483281 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
RXRB-204ENST00000483281 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
RXRB-204ENST00000483281 KRTAP20-2Q3LI61 65 aa6.06□□□□□ -1.44
RXRB-204ENST00000483281 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
RXRB-204ENST00000483281 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
RXRB-204ENST00000483281 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
RXRB-204ENST00000483281 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
RXRB-204ENST00000483281 MT3P25713 68 aa5.76□□□□□ -1.49
RXRB-204ENST00000483281 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
RXRB-204ENST00000483281 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
RXRB-204ENST00000483281 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
RXRB-204ENST00000483281 GPR98Q8WXG9 6306 aa5.3□□□□□ -1.56
RXRB-204ENST00000483281 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
RXRB-204ENST00000483281 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
RXRB-204ENST00000483281 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
RXRB-204ENST00000483281 PRM1P04553 51 aa5.19□□□□□ -1.58
RXRB-204ENST00000483281 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
RXRB-204ENST00000483281 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
RXRB-204ENST00000483281 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
RXRB-204ENST00000483281 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
RXRB-204ENST00000483281 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
RXRB-204ENST00000483281 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
RXRB-204ENST00000483281 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
RXRB-204ENST00000483281 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
RXRB-204ENST00000483281 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
RXRB-204ENST00000483281 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
RXRB-204ENST00000483281 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
RXRB-204ENST00000483281 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
RXRB-204ENST00000483281 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
RXRB-204ENST00000483281 KRTAP21-2Q3LI59 83 aa4.11□□□□□ -1.75
RXRB-204ENST00000483281 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
RXRB-204ENST00000483281 LCE1FQ5T754 118 aa4□□□□□ -1.77
RXRB-204ENST00000483281 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
RXRB-204ENST00000483281 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
RXRB-204ENST00000483281 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.86
RXRB-204ENST00000483281 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
RXRB-204ENST00000483281 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 280 ms