RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
MSL3-215ENST00000482871 KRTAP12-2P59991 146 aa3.67□□□□□ -1.82
MSL3-215ENST00000482871 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
MSL3-215ENST00000482871 MT2AP02795 61 aa3.62□□□□□ -1.83
MSL3-215ENST00000482871 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
MSL3-215ENST00000482871 MT1FP04733 61 aa3.59□□□□□ -1.83
MSL3-215ENST00000482871 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
MSL3-215ENST00000482871 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
MSL3-215ENST00000482871 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
MSL3-215ENST00000482871 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
MSL3-215ENST00000482871 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
MSL3-215ENST00000482871 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
MSL3-215ENST00000482871 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
MSL3-215ENST00000482871 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
MSL3-215ENST00000482871 USH2AO75445 5202 aa3.42□□□□□ -1.86
MSL3-215ENST00000482871 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
MSL3-215ENST00000482871 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
MSL3-215ENST00000482871 TNP1P09430 55 aa3.4□□□□□ -1.87
MSL3-215ENST00000482871 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
MSL3-215ENST00000482871 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
MSL3-215ENST00000482871 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
MSL3-215ENST00000482871 MT1BP07438 61 aa3.33□□□□□ -1.88
MSL3-215ENST00000482871 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
MSL3-215ENST00000482871 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
MSL3-215ENST00000482871 MT1XP80297 61 aa3.17□□□□□ -1.9
MSL3-215ENST00000482871 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
MSL3-215ENST00000482871 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
MSL3-215ENST00000482871 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
MSL3-215ENST00000482871 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
MSL3-215ENST00000482871 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
MSL3-215ENST00000482871 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
MSL3-215ENST00000482871 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
MSL3-215ENST00000482871 KMT2DO14686 5537 aa3□□□□□ -1.93
MSL3-215ENST00000482871 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
MSL3-215ENST00000482871 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
MSL3-215ENST00000482871 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
MSL3-215ENST00000482871 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
MSL3-215ENST00000482871 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
MSL3-215ENST00000482871 NEBP20929 6669 aa2.89□□□□□ -1.95
MSL3-215ENST00000482871 SPRR2EP22531 72 aa2.87□□□□□ -1.95
MSL3-215ENST00000482871 SPRR2BP35325 72 aa2.87□□□□□ -1.95
MSL3-215ENST00000482871 SPRR2AP35326 72 aa2.87□□□□□ -1.95
MSL3-215ENST00000482871 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
MSL3-215ENST00000482871 INE1O15225 51 aa2.86□□□□□ -1.95
MSL3-215ENST00000482871 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
MSL3-215ENST00000482871 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
MSL3-215ENST00000482871 MT1EP04732 61 aa2.8□□□□□ -1.96
MSL3-215ENST00000482871 SPRR2DP22532 72 aa2.77□□□□□ -1.97
MSL3-215ENST00000482871 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
MSL3-215ENST00000482871 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
MSL3-215ENST00000482871 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
MSL3-215ENST00000482871 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
MSL3-215ENST00000482871 MT1GP13640 62 aa2.72□□□□□ -1.97
MSL3-215ENST00000482871 MT1LQ93083 61 aa2.71□□□□□ -1.98
MSL3-215ENST00000482871 MT1MQ8N339 61 aa2.66□□□□□ -1.98
MSL3-215ENST00000482871 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
MSL3-215ENST00000482871 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
MSL3-215ENST00000482871 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
MSL3-215ENST00000482871 MT4P47944 62 aa2.42□□□□□ -2.02
MSL3-215ENST00000482871 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
MSL3-215ENST00000482871 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
MSL3-215ENST00000482871 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
MSL3-215ENST00000482871 MT1AP04731 61 aa2.32□□□□□ -2.04
MSL3-215ENST00000482871 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
MSL3-215ENST00000482871 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
MSL3-215ENST00000482871 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
MSL3-215ENST00000482871 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
MSL3-215ENST00000482871 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
MSL3-215ENST00000482871 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
MSL3-215ENST00000482871 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
MSL3-215ENST00000482871 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
MSL3-215ENST00000482871 PRM1P04553 51 aa1.98□□□□□ -2.09
MSL3-215ENST00000482871 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
MSL3-215ENST00000482871 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
MSL3-215ENST00000482871 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
MSL3-215ENST00000482871 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
MSL3-215ENST00000482871 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
MSL3-215ENST00000482871 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 159.4 ms