RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
APTX-225ENST00000482687 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
APTX-225ENST00000482687 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
APTX-225ENST00000482687 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
APTX-225ENST00000482687 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
APTX-225ENST00000482687 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
APTX-225ENST00000482687 KMT2DO14686 5537 aa4.01□□□□□ -1.77
APTX-225ENST00000482687 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
APTX-225ENST00000482687 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
APTX-225ENST00000482687 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
APTX-225ENST00000482687 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
APTX-225ENST00000482687 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
APTX-225ENST00000482687 MT1EP04732 61 aa3.73□□□□□ -1.81
APTX-225ENST00000482687 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
APTX-225ENST00000482687 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
APTX-225ENST00000482687 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
APTX-225ENST00000482687 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
APTX-225ENST00000482687 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
APTX-225ENST00000482687 MT1LQ93083 61 aa3.66□□□□□ -1.82
APTX-225ENST00000482687 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
APTX-225ENST00000482687 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
APTX-225ENST00000482687 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.82
APTX-225ENST00000482687 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
APTX-225ENST00000482687 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
APTX-225ENST00000482687 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
APTX-225ENST00000482687 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
APTX-225ENST00000482687 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
APTX-225ENST00000482687 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
APTX-225ENST00000482687 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
APTX-225ENST00000482687 NEBP20929 6669 aa3.53□□□□□ -1.84
APTX-225ENST00000482687 MT1GP13640 62 aa3.52□□□□□ -1.85
APTX-225ENST00000482687 MT1MQ8N339 61 aa3.52□□□□□ -1.85
APTX-225ENST00000482687 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
APTX-225ENST00000482687 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
APTX-225ENST00000482687 SPRR2EP22531 72 aa3.51□□□□□ -1.85
APTX-225ENST00000482687 SPRR2BP35325 72 aa3.51□□□□□ -1.85
APTX-225ENST00000482687 SPRR2AP35326 72 aa3.51□□□□□ -1.85
APTX-225ENST00000482687 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
APTX-225ENST00000482687 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
APTX-225ENST00000482687 SPRR2DP22532 72 aa3.37□□□□□ -1.87
APTX-225ENST00000482687 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
APTX-225ENST00000482687 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
APTX-225ENST00000482687 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
APTX-225ENST00000482687 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
APTX-225ENST00000482687 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
APTX-225ENST00000482687 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
APTX-225ENST00000482687 MT1AP04731 61 aa3.09□□□□□ -1.92
APTX-225ENST00000482687 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
APTX-225ENST00000482687 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
APTX-225ENST00000482687 MT4P47944 62 aa2.97□□□□□ -1.93
APTX-225ENST00000482687 PRM1P04553 51 aa2.92□□□□□ -1.94
APTX-225ENST00000482687 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
APTX-225ENST00000482687 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
APTX-225ENST00000482687 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
APTX-225ENST00000482687 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
APTX-225ENST00000482687 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
APTX-225ENST00000482687 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
APTX-225ENST00000482687 MT3P25713 68 aa2.79□□□□□ -1.96
APTX-225ENST00000482687 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
APTX-225ENST00000482687 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
APTX-225ENST00000482687 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
APTX-225ENST00000482687 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
APTX-225ENST00000482687 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
APTX-225ENST00000482687 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
APTX-225ENST00000482687 LCE1FQ5T754 118 aa2.56□□□□□ -2
APTX-225ENST00000482687 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
APTX-225ENST00000482687 LCE1EQ5T753 118 aa2.54□□□□□ -2
APTX-225ENST00000482687 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
APTX-225ENST00000482687 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
APTX-225ENST00000482687 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
APTX-225ENST00000482687 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
APTX-225ENST00000482687 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
APTX-225ENST00000482687 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
APTX-225ENST00000482687 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
APTX-225ENST00000482687 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
APTX-225ENST00000482687 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
APTX-225ENST00000482687 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
APTX-225ENST00000482687 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 76.3 ms