RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 R4GN34 69 aa3.27□□□□□ -1.89
CCNC-204ENST00000482541 NEBP20929 6669 aa3.27□□□□□ -1.89
CCNC-204ENST00000482541 A0A1B0GU69 56 aa3.24□□□□□ -1.89
CCNC-204ENST00000482541 MT1XP80297 61 aa3.24□□□□□ -1.89
CCNC-204ENST00000482541 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
CCNC-204ENST00000482541 M0QZ58 72 aa3.23□□□□□ -1.89
CCNC-204ENST00000482541 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CCNC-204ENST00000482541 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
CCNC-204ENST00000482541 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
CCNC-204ENST00000482541 ACYP2P14621 99 aa3.2□□□□□ -1.9
CCNC-204ENST00000482541 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
CCNC-204ENST00000482541 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
CCNC-204ENST00000482541 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
CCNC-204ENST00000482541 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
CCNC-204ENST00000482541 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
CCNC-204ENST00000482541 KMT2DO14686 5537 aa3.18□□□□□ -1.9
CCNC-204ENST00000482541 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
CCNC-204ENST00000482541 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
CCNC-204ENST00000482541 SPRR2EP22531 72 aa3.16□□□□□ -1.9
CCNC-204ENST00000482541 SPRR2BP35325 72 aa3.16□□□□□ -1.9
CCNC-204ENST00000482541 SPRR2AP35326 72 aa3.16□□□□□ -1.9
CCNC-204ENST00000482541 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
CCNC-204ENST00000482541 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
CCNC-204ENST00000482541 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
CCNC-204ENST00000482541 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
CCNC-204ENST00000482541 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
CCNC-204ENST00000482541 KRTAP2-1Q9BYU5 128 aa3.07□□□□□ -1.92
CCNC-204ENST00000482541 SPRR2DP22532 72 aa3.05□□□□□ -1.92
CCNC-204ENST00000482541 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
CCNC-204ENST00000482541 A0A1B0GU33 70 aa3.01□□□□□ -1.93
CCNC-204ENST00000482541 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
CCNC-204ENST00000482541 A0A0D9SG42 100 aa2.9□□□□□ -1.94
CCNC-204ENST00000482541 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.94
CCNC-204ENST00000482541 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
CCNC-204ENST00000482541 MT1EP04732 61 aa2.88□□□□□ -1.95
CCNC-204ENST00000482541 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
CCNC-204ENST00000482541 KRTAP19-3Q7Z4W3 81 aa2.88□□□□□ -1.95
CCNC-204ENST00000482541 KRTAP12-1P59990 96 aa2.87□□□□□ -1.95
CCNC-204ENST00000482541 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
CCNC-204ENST00000482541 MT1GP13640 62 aa2.83□□□□□ -1.96
CCNC-204ENST00000482541 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
CCNC-204ENST00000482541 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
CCNC-204ENST00000482541 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
CCNC-204ENST00000482541 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
CCNC-204ENST00000482541 TNP1P09430 55 aa2.76□□□□□ -1.97
CCNC-204ENST00000482541 INE1O15225 51 aa2.74□□□□□ -1.97
CCNC-204ENST00000482541 MT1MQ8N339 61 aa2.74□□□□□ -1.97
CCNC-204ENST00000482541 MT1LQ93083 61 aa2.74□□□□□ -1.97
CCNC-204ENST00000482541 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
CCNC-204ENST00000482541 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
CCNC-204ENST00000482541 MT4P47944 62 aa2.66□□□□□ -1.98
CCNC-204ENST00000482541 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
CCNC-204ENST00000482541 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
CCNC-204ENST00000482541 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
CCNC-204ENST00000482541 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
CCNC-204ENST00000482541 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
CCNC-204ENST00000482541 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
CCNC-204ENST00000482541 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
CCNC-204ENST00000482541 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
CCNC-204ENST00000482541 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CCNC-204ENST00000482541 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
CCNC-204ENST00000482541 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
CCNC-204ENST00000482541 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
CCNC-204ENST00000482541 MT1AP04731 61 aa2.34□□□□□ -2.03
CCNC-204ENST00000482541 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
CCNC-204ENST00000482541 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
CCNC-204ENST00000482541 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
CCNC-204ENST00000482541 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
CCNC-204ENST00000482541 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
CCNC-204ENST00000482541 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
CCNC-204ENST00000482541 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
CCNC-204ENST00000482541 PRM1P04553 51 aa1.64□□□□□ -2.15
CCNC-204ENST00000482541 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CCNC-204ENST00000482541 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CCNC-204ENST00000482541 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
CCNC-204ENST00000482541 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CCNC-204ENST00000482541 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 154.9 ms