RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
ATG4B-220ENST00000482507 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
ATG4B-220ENST00000482507 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.57
ATG4B-220ENST00000482507 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
ATG4B-220ENST00000482507 MT1LQ93083 61 aa5.14□□□□□ -1.59
ATG4B-220ENST00000482507 MT1EP04732 61 aa5.14□□□□□ -1.59
ATG4B-220ENST00000482507 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
ATG4B-220ENST00000482507 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
ATG4B-220ENST00000482507 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
ATG4B-220ENST00000482507 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
ATG4B-220ENST00000482507 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
ATG4B-220ENST00000482507 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
ATG4B-220ENST00000482507 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
ATG4B-220ENST00000482507 KRTAP6-3Q3LI67 103 aa4.97□□□□□ -1.61
ATG4B-220ENST00000482507 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
ATG4B-220ENST00000482507 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
ATG4B-220ENST00000482507 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
ATG4B-220ENST00000482507 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.62
ATG4B-220ENST00000482507 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
ATG4B-220ENST00000482507 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
ATG4B-220ENST00000482507 SPRR2EP22531 72 aa4.86□□□□□ -1.63
ATG4B-220ENST00000482507 SPRR2BP35325 72 aa4.86□□□□□ -1.63
ATG4B-220ENST00000482507 SPRR2AP35326 72 aa4.86□□□□□ -1.63
ATG4B-220ENST00000482507 MT1GP13640 62 aa4.82□□□□□ -1.64
ATG4B-220ENST00000482507 NEBP20929 6669 aa4.81□□□□□ -1.64
ATG4B-220ENST00000482507 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
ATG4B-220ENST00000482507 MT1MQ8N339 61 aa4.8□□□□□ -1.64
ATG4B-220ENST00000482507 SPRR2DP22532 72 aa4.67□□□□□ -1.66
ATG4B-220ENST00000482507 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
ATG4B-220ENST00000482507 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
ATG4B-220ENST00000482507 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
ATG4B-220ENST00000482507 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
ATG4B-220ENST00000482507 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
ATG4B-220ENST00000482507 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
ATG4B-220ENST00000482507 MT1AP04731 61 aa4.29□□□□□ -1.72
ATG4B-220ENST00000482507 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
ATG4B-220ENST00000482507 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
ATG4B-220ENST00000482507 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
ATG4B-220ENST00000482507 MT4P47944 62 aa4.14□□□□□ -1.75
ATG4B-220ENST00000482507 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
ATG4B-220ENST00000482507 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
ATG4B-220ENST00000482507 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
ATG4B-220ENST00000482507 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
ATG4B-220ENST00000482507 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
ATG4B-220ENST00000482507 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
ATG4B-220ENST00000482507 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
ATG4B-220ENST00000482507 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
ATG4B-220ENST00000482507 PRM1P04553 51 aa3.99□□□□□ -1.77
ATG4B-220ENST00000482507 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
ATG4B-220ENST00000482507 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
ATG4B-220ENST00000482507 MT3P25713 68 aa3.83□□□□□ -1.8
ATG4B-220ENST00000482507 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
ATG4B-220ENST00000482507 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
ATG4B-220ENST00000482507 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
ATG4B-220ENST00000482507 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
ATG4B-220ENST00000482507 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
ATG4B-220ENST00000482507 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
ATG4B-220ENST00000482507 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
ATG4B-220ENST00000482507 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
ATG4B-220ENST00000482507 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
ATG4B-220ENST00000482507 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
ATG4B-220ENST00000482507 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
ATG4B-220ENST00000482507 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
ATG4B-220ENST00000482507 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
ATG4B-220ENST00000482507 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
ATG4B-220ENST00000482507 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
ATG4B-220ENST00000482507 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
ATG4B-220ENST00000482507 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
ATG4B-220ENST00000482507 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
ATG4B-220ENST00000482507 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
ATG4B-220ENST00000482507 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
ATG4B-220ENST00000482507 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
ATG4B-220ENST00000482507 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
ATG4B-220ENST00000482507 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
ATG4B-220ENST00000482507 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
ATG4B-220ENST00000482507 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
ATG4B-220ENST00000482507 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
ATG4B-220ENST00000482507 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 91.2 ms