RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
CHKB-209ENST00000481673 SPRR2FQ96RM1 72 aa6.74□□□□□ -1.33
CHKB-209ENST00000481673 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
CHKB-209ENST00000481673 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
CHKB-209ENST00000481673 KRTAP9-6A8MVA2 160 aa6.69□□□□□ -1.34
CHKB-209ENST00000481673 MT1MQ8N339 61 aa6.67□□□□□ -1.34
CHKB-209ENST00000481673 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
CHKB-209ENST00000481673 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
CHKB-209ENST00000481673 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
CHKB-209ENST00000481673 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
CHKB-209ENST00000481673 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
CHKB-209ENST00000481673 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
CHKB-209ENST00000481673 LCE1AQ5T7P2 110 aa6.41□□□□□ -1.38
CHKB-209ENST00000481673 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
CHKB-209ENST00000481673 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
CHKB-209ENST00000481673 SYNE2Q8WXH0 6885 aaKnown RBP6.38□□□□□ -1.39
CHKB-209ENST00000481673 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
CHKB-209ENST00000481673 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
CHKB-209ENST00000481673 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
CHKB-209ENST00000481673 SPRR2EP22531 72 aa6.3□□□□□ -1.4
CHKB-209ENST00000481673 SPRR2BP35325 72 aa6.3□□□□□ -1.4
CHKB-209ENST00000481673 SPRR2AP35326 72 aa6.3□□□□□ -1.4
CHKB-209ENST00000481673 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
CHKB-209ENST00000481673 INE1O15225 51 aa6.26□□□□□ -1.41
CHKB-209ENST00000481673 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
CHKB-209ENST00000481673 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
CHKB-209ENST00000481673 SPRR2DP22532 72 aa6.08□□□□□ -1.44
CHKB-209ENST00000481673 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
CHKB-209ENST00000481673 MT1AP04731 61 aa5.98□□□□□ -1.45
CHKB-209ENST00000481673 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
CHKB-209ENST00000481673 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
CHKB-209ENST00000481673 NEBP20929 6669 aa5.8□□□□□ -1.48
CHKB-209ENST00000481673 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
CHKB-209ENST00000481673 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
CHKB-209ENST00000481673 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
CHKB-209ENST00000481673 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
CHKB-209ENST00000481673 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
CHKB-209ENST00000481673 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
CHKB-209ENST00000481673 MT3P25713 68 aa5.44□□□□□ -1.54
CHKB-209ENST00000481673 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
CHKB-209ENST00000481673 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.55
CHKB-209ENST00000481673 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
CHKB-209ENST00000481673 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
CHKB-209ENST00000481673 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
CHKB-209ENST00000481673 MT4P47944 62 aa5.23□□□□□ -1.57
CHKB-209ENST00000481673 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
CHKB-209ENST00000481673 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
CHKB-209ENST00000481673 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
CHKB-209ENST00000481673 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
CHKB-209ENST00000481673 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
CHKB-209ENST00000481673 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
CHKB-209ENST00000481673 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
CHKB-209ENST00000481673 PRM1P04553 51 aa4.74□□□□□ -1.65
CHKB-209ENST00000481673 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
CHKB-209ENST00000481673 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
CHKB-209ENST00000481673 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
CHKB-209ENST00000481673 KRTAP5-1Q6L8H4 278 aa4.37□□□□□ -1.71
CHKB-209ENST00000481673 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
CHKB-209ENST00000481673 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
CHKB-209ENST00000481673 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
CHKB-209ENST00000481673 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CHKB-209ENST00000481673 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
CHKB-209ENST00000481673 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
CHKB-209ENST00000481673 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
CHKB-209ENST00000481673 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
CHKB-209ENST00000481673 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
CHKB-209ENST00000481673 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
CHKB-209ENST00000481673 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
CHKB-209ENST00000481673 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
CHKB-209ENST00000481673 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
CHKB-209ENST00000481673 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CHKB-209ENST00000481673 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
CHKB-209ENST00000481673 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CHKB-209ENST00000481673 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CHKB-209ENST00000481673 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
CHKB-209ENST00000481673 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
CHKB-209ENST00000481673 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
CHKB-209ENST00000481673 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 64.9 ms