RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 RNF213Q63HN8 5207 aa3.73□□□□□ -1.81
DDX39B-219ENST00000481456 MUC2Q02817 5179 aa3.72□□□□□ -1.81
DDX39B-219ENST00000481456 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
DDX39B-219ENST00000481456 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.82
DDX39B-219ENST00000481456 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
DDX39B-219ENST00000481456 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
DDX39B-219ENST00000481456 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
DDX39B-219ENST00000481456 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
DDX39B-219ENST00000481456 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
DDX39B-219ENST00000481456 MT1MQ8N339 61 aa3.58□□□□□ -1.84
DDX39B-219ENST00000481456 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
DDX39B-219ENST00000481456 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
DDX39B-219ENST00000481456 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
DDX39B-219ENST00000481456 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
DDX39B-219ENST00000481456 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
DDX39B-219ENST00000481456 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
DDX39B-219ENST00000481456 PRM1P04553 51 aa3.44□□□□□ -1.86
DDX39B-219ENST00000481456 MT3P25713 68 aa3.39□□□□□ -1.87
DDX39B-219ENST00000481456 MT4P47944 62 aa3.35□□□□□ -1.87
DDX39B-219ENST00000481456 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
DDX39B-219ENST00000481456 MT1AP04731 61 aa3.34□□□□□ -1.88
DDX39B-219ENST00000481456 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
DDX39B-219ENST00000481456 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
DDX39B-219ENST00000481456 KMT2DO14686 5537 aa3.26□□□□□ -1.89
DDX39B-219ENST00000481456 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
DDX39B-219ENST00000481456 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
DDX39B-219ENST00000481456 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
DDX39B-219ENST00000481456 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
DDX39B-219ENST00000481456 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
DDX39B-219ENST00000481456 USH2AO75445 5202 aa3.2□□□□□ -1.9
DDX39B-219ENST00000481456 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
DDX39B-219ENST00000481456 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.9
DDX39B-219ENST00000481456 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
DDX39B-219ENST00000481456 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
DDX39B-219ENST00000481456 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
DDX39B-219ENST00000481456 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
DDX39B-219ENST00000481456 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
DDX39B-219ENST00000481456 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
DDX39B-219ENST00000481456 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
DDX39B-219ENST00000481456 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
DDX39B-219ENST00000481456 MACF1Q9UPN3 7388 aaKnown RBP2.97□□□□□ -1.93
DDX39B-219ENST00000481456 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
DDX39B-219ENST00000481456 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
DDX39B-219ENST00000481456 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
DDX39B-219ENST00000481456 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.96
DDX39B-219ENST00000481456 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
DDX39B-219ENST00000481456 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
DDX39B-219ENST00000481456 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
DDX39B-219ENST00000481456 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
DDX39B-219ENST00000481456 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
DDX39B-219ENST00000481456 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
DDX39B-219ENST00000481456 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
DDX39B-219ENST00000481456 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
DDX39B-219ENST00000481456 NEBP20929 6669 aa2.6□□□□□ -1.99
DDX39B-219ENST00000481456 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2.01
DDX39B-219ENST00000481456 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
DDX39B-219ENST00000481456 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
DDX39B-219ENST00000481456 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
DDX39B-219ENST00000481456 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
DDX39B-219ENST00000481456 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
DDX39B-219ENST00000481456 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
DDX39B-219ENST00000481456 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
DDX39B-219ENST00000481456 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
DDX39B-219ENST00000481456 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
DDX39B-219ENST00000481456 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
DDX39B-219ENST00000481456 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
DDX39B-219ENST00000481456 KRTAP5-3Q6L8H2 238 aa2.01□□□□□ -2.09
DDX39B-219ENST00000481456 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
DDX39B-219ENST00000481456 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
DDX39B-219ENST00000481456 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
DDX39B-219ENST00000481456 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
DDX39B-219ENST00000481456 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
DDX39B-219ENST00000481456 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.77□□□□□ -2.13
DDX39B-219ENST00000481456 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
DDX39B-219ENST00000481456 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
DDX39B-219ENST00000481456 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
DDX39B-219ENST00000481456 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
DDX39B-219ENST00000481456 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms