RNA–Protein interactions for RNA: ENST00000480887.5

RSF1-204, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RSF1, Length 5,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-204ENST00000480887 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
RSF1-204ENST00000480887 MT1LQ93083 61 aa1.84□□□□□ -2.12
RSF1-204ENST00000480887 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
RSF1-204ENST00000480887 LPAP08519 4548 aa1.82□□□□□ -2.12
RSF1-204ENST00000480887 KRTAP4-8A0A0G2JLE6 195 aa1.8□□□□□ -2.12
RSF1-204ENST00000480887 KRTAP4-8Q9BYQ9 185 aa1.8□□□□□ -2.12
RSF1-204ENST00000480887 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
RSF1-204ENST00000480887 MT1EP04732 61 aa1.79□□□□□ -2.12
RSF1-204ENST00000480887 LCE1DQ5T752 114 aa1.78□□□□□ -2.12
RSF1-204ENST00000480887 LCE1AQ5T7P2 110 aa1.78□□□□□ -2.12
RSF1-204ENST00000480887 UBR4Q5T4S7 5183 aa1.77□□□□□ -2.13
RSF1-204ENST00000480887 LCE4AQ5TA78 99 aa1.77□□□□□ -2.13
RSF1-204ENST00000480887 KRTAP2-2Q9BYT5 123 aa1.77□□□□□ -2.13
RSF1-204ENST00000480887 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
RSF1-204ENST00000480887 RNF213Q63HN8 5207 aa1.77□□□□□ -2.13
RSF1-204ENST00000480887 MT1MQ8N339 61 aa1.77□□□□□ -2.13
RSF1-204ENST00000480887 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
RSF1-204ENST00000480887 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
RSF1-204ENST00000480887 KRTAP19-2Q3LHN2 52 aa1.74□□□□□ -2.13
RSF1-204ENST00000480887 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
RSF1-204ENST00000480887 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.72□□□□□ -2.13
RSF1-204ENST00000480887 MT1AP04731 61 aa1.7□□□□□ -2.14
RSF1-204ENST00000480887 FAT4Q6V0I7 4981 aa1.69□□□□□ -2.14
RSF1-204ENST00000480887 FLGP20930 4061 aaPredicted RBP1.66□□□□□ -2.14
RSF1-204ENST00000480887 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
RSF1-204ENST00000480887 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
RSF1-204ENST00000480887 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
RSF1-204ENST00000480887 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
RSF1-204ENST00000480887 MUC2Q02817 5179 aa1.64□□□□□ -2.15
RSF1-204ENST00000480887 KRTAP5-3Q6L8H2 238 aa1.62□□□□□ -2.15
RSF1-204ENST00000480887 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
RSF1-204ENST00000480887 GPR98Q8WXG9 6306 aa1.61□□□□□ -2.15
RSF1-204ENST00000480887 KRTAP4-7Q9BYR0 210 aa1.6□□□□□ -2.15
RSF1-204ENST00000480887 PRM1P04553 51 aa1.58□□□□□ -2.16
RSF1-204ENST00000480887 KRTAP4-9Q9BYQ8 210 aa1.57□□□□□ -2.16
RSF1-204ENST00000480887 KRTAP9-4Q9BYQ2 154 aa1.54□□□□□ -2.16
RSF1-204ENST00000480887 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
RSF1-204ENST00000480887 KRTAP19-7Q3SYF9 63 aa1.52□□□□□ -2.17
RSF1-204ENST00000480887 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
RSF1-204ENST00000480887 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
RSF1-204ENST00000480887 KRTAP4-12Q9BQ66 201 aa1.51□□□□□ -2.17
RSF1-204ENST00000480887 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
RSF1-204ENST00000480887 NEBP20929 6669 aa1.5□□□□□ -2.17
RSF1-204ENST00000480887 KRTAP4-2Q9BYR5 136 aa1.49□□□□□ -2.17
RSF1-204ENST00000480887 USH2AO75445 5202 aa1.49□□□□□ -2.17
RSF1-204ENST00000480887 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
RSF1-204ENST00000480887 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
RSF1-204ENST00000480887 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
RSF1-204ENST00000480887 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
RSF1-204ENST00000480887 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
RSF1-204ENST00000480887 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
RSF1-204ENST00000480887 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
RSF1-204ENST00000480887 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
RSF1-204ENST00000480887 KRTAP20-2Q3LI61 65 aa1.31□□□□□ -2.2
RSF1-204ENST00000480887 KRTAP4-11Q9BYQ6 195 aa1.29□□□□□ -2.2
RSF1-204ENST00000480887 KMT2DO14686 5537 aa1.29□□□□□ -2.2
RSF1-204ENST00000480887 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
RSF1-204ENST00000480887 MUC12Q9UKN1 5478 aa1.29□□□□□ -2.2
RSF1-204ENST00000480887 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
RSF1-204ENST00000480887 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
RSF1-204ENST00000480887 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
RSF1-204ENST00000480887 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
RSF1-204ENST00000480887 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
RSF1-204ENST00000480887 HMCN1Q96RW7 5635 aa1.16□□□□□ -2.22
RSF1-204ENST00000480887 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
RSF1-204ENST00000480887 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
RSF1-204ENST00000480887 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
RSF1-204ENST00000480887 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
RSF1-204ENST00000480887 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
RSF1-204ENST00000480887 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
RSF1-204ENST00000480887 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
RSF1-204ENST00000480887 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
RSF1-204ENST00000480887 KRTAP5-7Q6L8G8 165 aa0.88□□□□□ -2.27
RSF1-204ENST00000480887 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
RSF1-204ENST00000480887 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
RSF1-204ENST00000480887 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
RSF1-204ENST00000480887 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 59.6 ms