RNA–Protein interactions for RNA: ENST00000480683.2

KCNMA1-219, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-219ENST00000480683 MACF1Q9UPN3 7388 aaKnown RBP5.77□□□□□ -1.49
KCNMA1-219ENST00000480683 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
KCNMA1-219ENST00000480683 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
KCNMA1-219ENST00000480683 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
KCNMA1-219ENST00000480683 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
KCNMA1-219ENST00000480683 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
KCNMA1-219ENST00000480683 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
KCNMA1-219ENST00000480683 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
KCNMA1-219ENST00000480683 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
KCNMA1-219ENST00000480683 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
KCNMA1-219ENST00000480683 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
KCNMA1-219ENST00000480683 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
KCNMA1-219ENST00000480683 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
KCNMA1-219ENST00000480683 NEBP20929 6669 aa5.35□□□□□ -1.55
KCNMA1-219ENST00000480683 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
KCNMA1-219ENST00000480683 MT1GP13640 62 aa5.25□□□□□ -1.57
KCNMA1-219ENST00000480683 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
KCNMA1-219ENST00000480683 MT1LQ93083 61 aa5.19□□□□□ -1.58
KCNMA1-219ENST00000480683 MT1EP04732 61 aa5.14□□□□□ -1.59
KCNMA1-219ENST00000480683 KRTAP5-9P26371 169 aa5.13□□□□□ -1.59
KCNMA1-219ENST00000480683 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.6
KCNMA1-219ENST00000480683 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
KCNMA1-219ENST00000480683 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
KCNMA1-219ENST00000480683 SPRR2EP22531 72 aa4.99□□□□□ -1.61
KCNMA1-219ENST00000480683 SPRR2BP35325 72 aa4.99□□□□□ -1.61
KCNMA1-219ENST00000480683 SPRR2AP35326 72 aa4.99□□□□□ -1.61
KCNMA1-219ENST00000480683 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
KCNMA1-219ENST00000480683 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
KCNMA1-219ENST00000480683 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
KCNMA1-219ENST00000480683 SPRR2DP22532 72 aa4.82□□□□□ -1.64
KCNMA1-219ENST00000480683 MT1MQ8N339 61 aa4.82□□□□□ -1.64
KCNMA1-219ENST00000480683 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
KCNMA1-219ENST00000480683 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
KCNMA1-219ENST00000480683 PRM1P04553 51 aa4.59□□□□□ -1.67
KCNMA1-219ENST00000480683 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
KCNMA1-219ENST00000480683 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
KCNMA1-219ENST00000480683 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
KCNMA1-219ENST00000480683 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
KCNMA1-219ENST00000480683 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
KCNMA1-219ENST00000480683 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
KCNMA1-219ENST00000480683 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
KCNMA1-219ENST00000480683 MT1AP04731 61 aa4.27□□□□□ -1.73
KCNMA1-219ENST00000480683 MT4P47944 62 aa4.27□□□□□ -1.73
KCNMA1-219ENST00000480683 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
KCNMA1-219ENST00000480683 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
KCNMA1-219ENST00000480683 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
KCNMA1-219ENST00000480683 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
KCNMA1-219ENST00000480683 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
KCNMA1-219ENST00000480683 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
KCNMA1-219ENST00000480683 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
KCNMA1-219ENST00000480683 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
KCNMA1-219ENST00000480683 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
KCNMA1-219ENST00000480683 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
KCNMA1-219ENST00000480683 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
KCNMA1-219ENST00000480683 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
KCNMA1-219ENST00000480683 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
KCNMA1-219ENST00000480683 MT3P25713 68 aa3.81□□□□□ -1.8
KCNMA1-219ENST00000480683 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
KCNMA1-219ENST00000480683 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
KCNMA1-219ENST00000480683 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
KCNMA1-219ENST00000480683 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
KCNMA1-219ENST00000480683 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
KCNMA1-219ENST00000480683 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
KCNMA1-219ENST00000480683 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
KCNMA1-219ENST00000480683 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
KCNMA1-219ENST00000480683 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
KCNMA1-219ENST00000480683 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
KCNMA1-219ENST00000480683 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
KCNMA1-219ENST00000480683 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
KCNMA1-219ENST00000480683 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
KCNMA1-219ENST00000480683 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
KCNMA1-219ENST00000480683 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
KCNMA1-219ENST00000480683 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
KCNMA1-219ENST00000480683 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
KCNMA1-219ENST00000480683 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
KCNMA1-219ENST00000480683 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
KCNMA1-219ENST00000480683 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms