RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
ABCF3-214ENST00000480562 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
ABCF3-214ENST00000480562 A8MU10 97 aa6.56□□□□□ -1.36
ABCF3-214ENST00000480562 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
ABCF3-214ENST00000480562 TNP1P09430 55 aa6.49□□□□□ -1.37
ABCF3-214ENST00000480562 ANAPC13Q9BS18 74 aa6.48□□□□□ -1.37
ABCF3-214ENST00000480562 KRTAP5-10Q6L8G5 202 aa6.43□□□□□ -1.38
ABCF3-214ENST00000480562 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
ABCF3-214ENST00000480562 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
ABCF3-214ENST00000480562 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
ABCF3-214ENST00000480562 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
ABCF3-214ENST00000480562 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
ABCF3-214ENST00000480562 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
ABCF3-214ENST00000480562 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
ABCF3-214ENST00000480562 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
ABCF3-214ENST00000480562 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
ABCF3-214ENST00000480562 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
ABCF3-214ENST00000480562 TMEM258P61165 79 aa6.16□□□□□ -1.42
ABCF3-214ENST00000480562 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
ABCF3-214ENST00000480562 UQCR11O14957 56 aa6.12□□□□□ -1.43
ABCF3-214ENST00000480562 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
ABCF3-214ENST00000480562 KRTAP12-4P60329 112 aa6.06□□□□□ -1.44
ABCF3-214ENST00000480562 H3BS24 57 aa6□□□□□ -1.45
ABCF3-214ENST00000480562 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
ABCF3-214ENST00000480562 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
ABCF3-214ENST00000480562 K7ERS5 55 aa5.91□□□□□ -1.46
ABCF3-214ENST00000480562 V9GYY9 64 aa5.9□□□□□ -1.46
ABCF3-214ENST00000480562 RPS28P62857 69 aaKnown RBP5.87□□□□□ -1.47
ABCF3-214ENST00000480562 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
ABCF3-214ENST00000480562 PRO0628Q9UI54 55 aa5.81□□□□□ -1.48
ABCF3-214ENST00000480562 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
ABCF3-214ENST00000480562 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
ABCF3-214ENST00000480562 PSPHP1O15172 72 aa5.76□□□□□ -1.49
ABCF3-214ENST00000480562 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
ABCF3-214ENST00000480562 KRTAP4-12Q9BQ66 201 aa5.72□□□□□ -1.49
ABCF3-214ENST00000480562 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
ABCF3-214ENST00000480562 Q1T7F1 81 aa5.69□□□□□ -1.5
ABCF3-214ENST00000480562 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
ABCF3-214ENST00000480562 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
ABCF3-214ENST00000480562 MT1AP04731 61 aa5.67□□□□□ -1.5
ABCF3-214ENST00000480562 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
ABCF3-214ENST00000480562 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
ABCF3-214ENST00000480562 A6NED7 52 aa5.55□□□□□ -1.52
ABCF3-214ENST00000480562 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
ABCF3-214ENST00000480562 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
ABCF3-214ENST00000480562 PMAIP1Q13794 54 aa5.51□□□□□ -1.53
ABCF3-214ENST00000480562 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
ABCF3-214ENST00000480562 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
ABCF3-214ENST00000480562 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
ABCF3-214ENST00000480562 ROMO1P60602 79 aa5.45□□□□□ -1.54
ABCF3-214ENST00000480562 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
ABCF3-214ENST00000480562 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
ABCF3-214ENST00000480562 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
ABCF3-214ENST00000480562 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
ABCF3-214ENST00000480562 KTN1-AS1Q86SY8 53 aa5.24□□□□□ -1.57
ABCF3-214ENST00000480562 MT3P25713 68 aa5.19□□□□□ -1.58
ABCF3-214ENST00000480562 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
ABCF3-214ENST00000480562 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
ABCF3-214ENST00000480562 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
ABCF3-214ENST00000480562 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
ABCF3-214ENST00000480562 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
ABCF3-214ENST00000480562 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
ABCF3-214ENST00000480562 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
ABCF3-214ENST00000480562 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
ABCF3-214ENST00000480562 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
ABCF3-214ENST00000480562 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
ABCF3-214ENST00000480562 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
ABCF3-214ENST00000480562 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
ABCF3-214ENST00000480562 LCE1FQ5T754 118 aa4□□□□□ -1.77
ABCF3-214ENST00000480562 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
ABCF3-214ENST00000480562 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
ABCF3-214ENST00000480562 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
ABCF3-214ENST00000480562 INE1O15225 51 aa3.68□□□□□ -1.82
ABCF3-214ENST00000480562 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
ABCF3-214ENST00000480562 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.86
ABCF3-214ENST00000480562 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
ABCF3-214ENST00000480562 PRM1P04553 51 aa2.77□□□□□ -1.97
ABCF3-214ENST00000480562 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms