RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
SH3D21-203ENST00000480549 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
SH3D21-203ENST00000480549 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
SH3D21-203ENST00000480549 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
SH3D21-203ENST00000480549 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
SH3D21-203ENST00000480549 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
SH3D21-203ENST00000480549 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
SH3D21-203ENST00000480549 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
SH3D21-203ENST00000480549 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
SH3D21-203ENST00000480549 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
SH3D21-203ENST00000480549 MT1GP13640 62 aa5.6□□□□□ -1.51
SH3D21-203ENST00000480549 MT1MQ8N339 61 aa5.59□□□□□ -1.51
SH3D21-203ENST00000480549 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
SH3D21-203ENST00000480549 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
SH3D21-203ENST00000480549 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
SH3D21-203ENST00000480549 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
SH3D21-203ENST00000480549 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
SH3D21-203ENST00000480549 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
SH3D21-203ENST00000480549 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
SH3D21-203ENST00000480549 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
SH3D21-203ENST00000480549 MDN1Q9NU22 5596 aa5.34□□□□□ -1.55
SH3D21-203ENST00000480549 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.56
SH3D21-203ENST00000480549 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
SH3D21-203ENST00000480549 SPRR2EP22531 72 aa5.22□□□□□ -1.57
SH3D21-203ENST00000480549 SPRR2BP35325 72 aa5.22□□□□□ -1.57
SH3D21-203ENST00000480549 SPRR2AP35326 72 aa5.22□□□□□ -1.57
SH3D21-203ENST00000480549 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
SH3D21-203ENST00000480549 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
SH3D21-203ENST00000480549 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
SH3D21-203ENST00000480549 SPRR2DP22532 72 aa5.02□□□□□ -1.61
SH3D21-203ENST00000480549 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
SH3D21-203ENST00000480549 MT1AP04731 61 aa4.97□□□□□ -1.61
SH3D21-203ENST00000480549 LCE3BQ5TA77 95 aa4.9□□□□□ -1.62
SH3D21-203ENST00000480549 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
SH3D21-203ENST00000480549 PRM1P04553 51 aa4.88□□□□□ -1.63
SH3D21-203ENST00000480549 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
SH3D21-203ENST00000480549 NEBP20929 6669 aa4.83□□□□□ -1.64
SH3D21-203ENST00000480549 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
SH3D21-203ENST00000480549 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
SH3D21-203ENST00000480549 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
SH3D21-203ENST00000480549 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
SH3D21-203ENST00000480549 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
SH3D21-203ENST00000480549 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
SH3D21-203ENST00000480549 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
SH3D21-203ENST00000480549 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
SH3D21-203ENST00000480549 MT3P25713 68 aa4.47□□□□□ -1.69
SH3D21-203ENST00000480549 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
SH3D21-203ENST00000480549 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
SH3D21-203ENST00000480549 MT4P47944 62 aa4.38□□□□□ -1.71
SH3D21-203ENST00000480549 LCE1DQ5T752 114 aa4.34□□□□□ -1.72
SH3D21-203ENST00000480549 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
SH3D21-203ENST00000480549 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
SH3D21-203ENST00000480549 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
SH3D21-203ENST00000480549 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
SH3D21-203ENST00000480549 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
SH3D21-203ENST00000480549 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
SH3D21-203ENST00000480549 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
SH3D21-203ENST00000480549 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
SH3D21-203ENST00000480549 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
SH3D21-203ENST00000480549 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
SH3D21-203ENST00000480549 MUC5ACP98088 5654 aa3.71□□□□□ -1.81
SH3D21-203ENST00000480549 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
SH3D21-203ENST00000480549 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.82
SH3D21-203ENST00000480549 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
SH3D21-203ENST00000480549 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
SH3D21-203ENST00000480549 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
SH3D21-203ENST00000480549 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
SH3D21-203ENST00000480549 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SH3D21-203ENST00000480549 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
SH3D21-203ENST00000480549 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
SH3D21-203ENST00000480549 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
SH3D21-203ENST00000480549 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
SH3D21-203ENST00000480549 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
SH3D21-203ENST00000480549 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
SH3D21-203ENST00000480549 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
SH3D21-203ENST00000480549 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
SH3D21-203ENST00000480549 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
SH3D21-203ENST00000480549 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms