RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SPRR2DP22532 72 aa3.63□□□□□ -1.83
VCP-206ENST00000480327 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
VCP-206ENST00000480327 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
VCP-206ENST00000480327 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
VCP-206ENST00000480327 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
VCP-206ENST00000480327 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
VCP-206ENST00000480327 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
VCP-206ENST00000480327 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
VCP-206ENST00000480327 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
VCP-206ENST00000480327 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
VCP-206ENST00000480327 TNP1P09430 55 aa3.46□□□□□ -1.86
VCP-206ENST00000480327 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
VCP-206ENST00000480327 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
VCP-206ENST00000480327 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
VCP-206ENST00000480327 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
VCP-206ENST00000480327 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
VCP-206ENST00000480327 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
VCP-206ENST00000480327 MT1EP04732 61 aa3.33□□□□□ -1.88
VCP-206ENST00000480327 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
VCP-206ENST00000480327 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
VCP-206ENST00000480327 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
VCP-206ENST00000480327 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
VCP-206ENST00000480327 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
VCP-206ENST00000480327 MT1LQ93083 61 aa3.22□□□□□ -1.89
VCP-206ENST00000480327 MT4P47944 62 aa3.21□□□□□ -1.9
VCP-206ENST00000480327 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
VCP-206ENST00000480327 MT1GP13640 62 aa3.19□□□□□ -1.9
VCP-206ENST00000480327 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
VCP-206ENST00000480327 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
VCP-206ENST00000480327 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
VCP-206ENST00000480327 MT1MQ8N339 61 aa3.16□□□□□ -1.9
VCP-206ENST00000480327 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
VCP-206ENST00000480327 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
VCP-206ENST00000480327 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
VCP-206ENST00000480327 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
VCP-206ENST00000480327 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
VCP-206ENST00000480327 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
VCP-206ENST00000480327 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
VCP-206ENST00000480327 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
VCP-206ENST00000480327 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
VCP-206ENST00000480327 INE1O15225 51 aa2.98□□□□□ -1.93
VCP-206ENST00000480327 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
VCP-206ENST00000480327 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
VCP-206ENST00000480327 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
VCP-206ENST00000480327 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
VCP-206ENST00000480327 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
VCP-206ENST00000480327 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
VCP-206ENST00000480327 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
VCP-206ENST00000480327 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
VCP-206ENST00000480327 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
VCP-206ENST00000480327 MT1AP04731 61 aa2.73□□□□□ -1.97
VCP-206ENST00000480327 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
VCP-206ENST00000480327 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
VCP-206ENST00000480327 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
VCP-206ENST00000480327 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
VCP-206ENST00000480327 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
VCP-206ENST00000480327 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
VCP-206ENST00000480327 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
VCP-206ENST00000480327 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
VCP-206ENST00000480327 MT3P25713 68 aa2.5□□□□□ -2.01
VCP-206ENST00000480327 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
VCP-206ENST00000480327 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
VCP-206ENST00000480327 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
VCP-206ENST00000480327 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
VCP-206ENST00000480327 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
VCP-206ENST00000480327 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
VCP-206ENST00000480327 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
VCP-206ENST00000480327 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
VCP-206ENST00000480327 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
VCP-206ENST00000480327 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
VCP-206ENST00000480327 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
VCP-206ENST00000480327 PRM1P04553 51 aa1.87□□□□□ -2.11
VCP-206ENST00000480327 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
VCP-206ENST00000480327 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
VCP-206ENST00000480327 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
VCP-206ENST00000480327 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
VCP-206ENST00000480327 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
VCP-206ENST00000480327 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 63.9 ms