RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
ABCF1-206ENST00000479542 SMIM26A0A096LP01 95 aa4.79□□□□□ -1.64
ABCF1-206ENST00000479542 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
ABCF1-206ENST00000479542 A8MU10 97 aa4.77□□□□□ -1.65
ABCF1-206ENST00000479542 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
ABCF1-206ENST00000479542 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
ABCF1-206ENST00000479542 MT4P47944 62 aa4.75□□□□□ -1.65
ABCF1-206ENST00000479542 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
ABCF1-206ENST00000479542 MT1MQ8N339 61 aa4.74□□□□□ -1.65
ABCF1-206ENST00000479542 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
ABCF1-206ENST00000479542 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
ABCF1-206ENST00000479542 MT1LQ93083 61 aa4.7□□□□□ -1.66
ABCF1-206ENST00000479542 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
ABCF1-206ENST00000479542 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
ABCF1-206ENST00000479542 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
ABCF1-206ENST00000479542 Q1T7F1 81 aa4.65□□□□□ -1.67
ABCF1-206ENST00000479542 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
ABCF1-206ENST00000479542 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
ABCF1-206ENST00000479542 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
ABCF1-206ENST00000479542 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
ABCF1-206ENST00000479542 TNP1P09430 55 aa4.6□□□□□ -1.67
ABCF1-206ENST00000479542 V9GYY9 64 aa4.6□□□□□ -1.67
ABCF1-206ENST00000479542 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
ABCF1-206ENST00000479542 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
ABCF1-206ENST00000479542 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
ABCF1-206ENST00000479542 UQCR11O14957 56 aa4.55□□□□□ -1.68
ABCF1-206ENST00000479542 PSPHP1O15172 72 aa4.55□□□□□ -1.68
ABCF1-206ENST00000479542 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
ABCF1-206ENST00000479542 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
ABCF1-206ENST00000479542 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
ABCF1-206ENST00000479542 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
ABCF1-206ENST00000479542 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
ABCF1-206ENST00000479542 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
ABCF1-206ENST00000479542 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
ABCF1-206ENST00000479542 A6NED7 52 aa4.39□□□□□ -1.71
ABCF1-206ENST00000479542 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
ABCF1-206ENST00000479542 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
ABCF1-206ENST00000479542 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
ABCF1-206ENST00000479542 K7ERS5 55 aa4.35□□□□□ -1.71
ABCF1-206ENST00000479542 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
ABCF1-206ENST00000479542 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
ABCF1-206ENST00000479542 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
ABCF1-206ENST00000479542 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
ABCF1-206ENST00000479542 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
ABCF1-206ENST00000479542 ROMO1P60602 79 aa4.08□□□□□ -1.76
ABCF1-206ENST00000479542 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
ABCF1-206ENST00000479542 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
ABCF1-206ENST00000479542 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
ABCF1-206ENST00000479542 MT1AP04731 61 aa4.01□□□□□ -1.77
ABCF1-206ENST00000479542 MT3P25713 68 aa4□□□□□ -1.77
ABCF1-206ENST00000479542 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
ABCF1-206ENST00000479542 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
ABCF1-206ENST00000479542 MUC5ACP98088 5654 aa3.96□□□□□ -1.77
ABCF1-206ENST00000479542 MUC5BQ9HC84 5762 aaPredicted RBP3.94□□□□□ -1.78
ABCF1-206ENST00000479542 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
ABCF1-206ENST00000479542 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
ABCF1-206ENST00000479542 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
ABCF1-206ENST00000479542 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
ABCF1-206ENST00000479542 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
ABCF1-206ENST00000479542 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
ABCF1-206ENST00000479542 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
ABCF1-206ENST00000479542 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
ABCF1-206ENST00000479542 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
ABCF1-206ENST00000479542 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ABCF1-206ENST00000479542 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
ABCF1-206ENST00000479542 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
ABCF1-206ENST00000479542 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
ABCF1-206ENST00000479542 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
ABCF1-206ENST00000479542 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
ABCF1-206ENST00000479542 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
ABCF1-206ENST00000479542 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
ABCF1-206ENST00000479542 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
ABCF1-206ENST00000479542 INE1O15225 51 aa2.43□□□□□ -2.02
ABCF1-206ENST00000479542 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
ABCF1-206ENST00000479542 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
ABCF1-206ENST00000479542 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
ABCF1-206ENST00000479542 PRM1P04553 51 aa2.11□□□□□ -2.07
ABCF1-206ENST00000479542 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 323.9 ms