RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 KRTAP2-1Q9BYU5 128 aa8.48□□□□□ -1.05
SYNGAP1-206ENST00000479510 KRTAP19-6Q3LI70 58 aa8.47□□□□□ -1.05
SYNGAP1-206ENST00000479510 KRTAP4-7Q9BYR0 210 aa8.43□□□□□ -1.06
SYNGAP1-206ENST00000479510 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
SYNGAP1-206ENST00000479510 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
SYNGAP1-206ENST00000479510 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
SYNGAP1-206ENST00000479510 MT1GP13640 62 aa8.03□□□□□ -1.12
SYNGAP1-206ENST00000479510 KRTAP19-3Q7Z4W3 81 aa8.01□□□□□ -1.13
SYNGAP1-206ENST00000479510 MT1MQ8N339 61 aa7.98□□□□□ -1.13
SYNGAP1-206ENST00000479510 KRTAP4-3Q9BYR4 195 aa7.9□□□□□ -1.14
SYNGAP1-206ENST00000479510 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
SYNGAP1-206ENST00000479510 MACF1Q9UPN3 7388 aaKnown RBP7.79□□□□□ -1.16
SYNGAP1-206ENST00000479510 LCE5AQ5TCM9 118 aa7.74□□□□□ -1.17
SYNGAP1-206ENST00000479510 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.63□□□□□ -1.19
SYNGAP1-206ENST00000479510 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
SYNGAP1-206ENST00000479510 MUC12Q9UKN1 5478 aa7.57□□□□□ -1.2
SYNGAP1-206ENST00000479510 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
SYNGAP1-206ENST00000479510 SYNE2Q8WXH0 6885 aaKnown RBP7.55□□□□□ -1.2
SYNGAP1-206ENST00000479510 KRTAP12-4P60329 112 aa7.4□□□□□ -1.23
SYNGAP1-206ENST00000479510 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
SYNGAP1-206ENST00000479510 MT1AP04731 61 aa7.29□□□□□ -1.24
SYNGAP1-206ENST00000479510 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
SYNGAP1-206ENST00000479510 MDN1Q9NU22 5596 aa7.23□□□□□ -1.25
SYNGAP1-206ENST00000479510 KRTAP6-1Q3LI64 71 aa7.19□□□□□ -1.26
SYNGAP1-206ENST00000479510 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
SYNGAP1-206ENST00000479510 KRTAP6-3Q3LI67 103 aa7.15□□□□□ -1.26
SYNGAP1-206ENST00000479510 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
SYNGAP1-206ENST00000479510 SPRR2EP22531 72 aa7.1□□□□□ -1.27
SYNGAP1-206ENST00000479510 SPRR2BP35325 72 aa7.1□□□□□ -1.27
SYNGAP1-206ENST00000479510 SPRR2AP35326 72 aa7.1□□□□□ -1.27
SYNGAP1-206ENST00000479510 KRTAP5-5Q701N2 237 aaPredicted RBP7.1□□□□□ -1.27
SYNGAP1-206ENST00000479510 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
SYNGAP1-206ENST00000479510 LCE3DQ9BYE3 92 aa6.97□□□□□ -1.29
SYNGAP1-206ENST00000479510 LCE3EQ5T5B0 92 aa6.91□□□□□ -1.3
SYNGAP1-206ENST00000479510 NEBP20929 6669 aa6.84□□□□□ -1.32
SYNGAP1-206ENST00000479510 SPRR2DP22532 72 aa6.83□□□□□ -1.32
SYNGAP1-206ENST00000479510 SYNE1Q8NF91 8797 aaKnown RBP6.82□□□□□ -1.32
SYNGAP1-206ENST00000479510 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
SYNGAP1-206ENST00000479510 KRTAP20-1Q3LI63 56 aa6.62□□□□□ -1.35
SYNGAP1-206ENST00000479510 PRM1P04553 51 aa6.51□□□□□ -1.37
SYNGAP1-206ENST00000479510 MT3P25713 68 aa6.51□□□□□ -1.37
SYNGAP1-206ENST00000479510 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
SYNGAP1-206ENST00000479510 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
SYNGAP1-206ENST00000479510 KRTAP2-2Q9BYT5 123 aa6.24□□□□□ -1.41
SYNGAP1-206ENST00000479510 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
SYNGAP1-206ENST00000479510 MT4P47944 62 aa5.95□□□□□ -1.46
SYNGAP1-206ENST00000479510 KRTAP4-6Q9BYQ5 205 aa5.92□□□□□ -1.46
SYNGAP1-206ENST00000479510 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
SYNGAP1-206ENST00000479510 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.47
SYNGAP1-206ENST00000479510 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
SYNGAP1-206ENST00000479510 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
SYNGAP1-206ENST00000479510 HMCN1Q96RW7 5635 aa5.8□□□□□ -1.48
SYNGAP1-206ENST00000479510 KRTAP5-3Q6L8H2 238 aa5.57□□□□□ -1.52
SYNGAP1-206ENST00000479510 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
SYNGAP1-206ENST00000479510 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
SYNGAP1-206ENST00000479510 AHNAK2Q8IVF2 5795 aa5.28□□□□□ -1.56
SYNGAP1-206ENST00000479510 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
SYNGAP1-206ENST00000479510 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
SYNGAP1-206ENST00000479510 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
SYNGAP1-206ENST00000479510 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
SYNGAP1-206ENST00000479510 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
SYNGAP1-206ENST00000479510 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
SYNGAP1-206ENST00000479510 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
SYNGAP1-206ENST00000479510 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
SYNGAP1-206ENST00000479510 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
SYNGAP1-206ENST00000479510 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
SYNGAP1-206ENST00000479510 KRTAP21-2Q3LI59 83 aa4.69□□□□□ -1.66
SYNGAP1-206ENST00000479510 MUC5BQ9HC84 5762 aaPredicted RBP4.37□□□□□ -1.71
SYNGAP1-206ENST00000479510 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
SYNGAP1-206ENST00000479510 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
SYNGAP1-206ENST00000479510 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
SYNGAP1-206ENST00000479510 KRTAP21-1Q3LI58 79 aa4.18□□□□□ -1.74
SYNGAP1-206ENST00000479510 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
SYNGAP1-206ENST00000479510 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SYNGAP1-206ENST00000479510 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
SYNGAP1-206ENST00000479510 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
SYNGAP1-206ENST00000479510 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
SYNGAP1-206ENST00000479510 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms