RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
NUP35-209ENST00000479162 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.82
NUP35-209ENST00000479162 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
NUP35-209ENST00000479162 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
NUP35-209ENST00000479162 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
NUP35-209ENST00000479162 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
NUP35-209ENST00000479162 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
NUP35-209ENST00000479162 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
NUP35-209ENST00000479162 NEBP20929 6669 aa3.56□□□□□ -1.84
NUP35-209ENST00000479162 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
NUP35-209ENST00000479162 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
NUP35-209ENST00000479162 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
NUP35-209ENST00000479162 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
NUP35-209ENST00000479162 MT1BP07438 61 aa3.52□□□□□ -1.85
NUP35-209ENST00000479162 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
NUP35-209ENST00000479162 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
NUP35-209ENST00000479162 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
NUP35-209ENST00000479162 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
NUP35-209ENST00000479162 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
NUP35-209ENST00000479162 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.86
NUP35-209ENST00000479162 USH2AO75445 5202 aa3.38□□□□□ -1.87
NUP35-209ENST00000479162 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
NUP35-209ENST00000479162 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
NUP35-209ENST00000479162 MT1XP80297 61 aa3.33□□□□□ -1.88
NUP35-209ENST00000479162 PRM1P04553 51 aa3.32□□□□□ -1.88
NUP35-209ENST00000479162 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
NUP35-209ENST00000479162 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
NUP35-209ENST00000479162 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
NUP35-209ENST00000479162 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
NUP35-209ENST00000479162 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
NUP35-209ENST00000479162 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
NUP35-209ENST00000479162 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
NUP35-209ENST00000479162 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
NUP35-209ENST00000479162 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
NUP35-209ENST00000479162 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
NUP35-209ENST00000479162 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
NUP35-209ENST00000479162 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
NUP35-209ENST00000479162 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
NUP35-209ENST00000479162 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
NUP35-209ENST00000479162 MT1AP04731 61 aa2.97□□□□□ -1.93
NUP35-209ENST00000479162 MT1EP04732 61 aa2.97□□□□□ -1.93
NUP35-209ENST00000479162 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
NUP35-209ENST00000479162 MT3P25713 68 aa2.96□□□□□ -1.94
NUP35-209ENST00000479162 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
NUP35-209ENST00000479162 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
NUP35-209ENST00000479162 SPRR2EP22531 72 aa2.95□□□□□ -1.94
NUP35-209ENST00000479162 SPRR2BP35325 72 aa2.95□□□□□ -1.94
NUP35-209ENST00000479162 SPRR2AP35326 72 aa2.95□□□□□ -1.94
NUP35-209ENST00000479162 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
NUP35-209ENST00000479162 KMT2DO14686 5537 aa2.9□□□□□ -1.95
NUP35-209ENST00000479162 MT1GP13640 62 aa2.89□□□□□ -1.95
NUP35-209ENST00000479162 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
NUP35-209ENST00000479162 MT1LQ93083 61 aa2.88□□□□□ -1.95
NUP35-209ENST00000479162 SPRR2DP22532 72 aa2.87□□□□□ -1.95
NUP35-209ENST00000479162 MT1MQ8N339 61 aa2.8□□□□□ -1.96
NUP35-209ENST00000479162 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
NUP35-209ENST00000479162 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
NUP35-209ENST00000479162 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
NUP35-209ENST00000479162 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
NUP35-209ENST00000479162 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
NUP35-209ENST00000479162 KRTAP4-3Q9BYR4 195 aa2.64□□□□□ -1.99
NUP35-209ENST00000479162 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
NUP35-209ENST00000479162 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
NUP35-209ENST00000479162 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
NUP35-209ENST00000479162 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
NUP35-209ENST00000479162 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
NUP35-209ENST00000479162 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
NUP35-209ENST00000479162 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
NUP35-209ENST00000479162 MT4P47944 62 aa2.37□□□□□ -2.03
NUP35-209ENST00000479162 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
NUP35-209ENST00000479162 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
NUP35-209ENST00000479162 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NUP35-209ENST00000479162 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
NUP35-209ENST00000479162 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
NUP35-209ENST00000479162 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
NUP35-209ENST00000479162 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
NUP35-209ENST00000479162 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
NUP35-209ENST00000479162 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms