RNA–Protein interactions for RNA: ENST00000479002.1

CAD-208, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-208ENST00000479002 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
CAD-208ENST00000479002 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
CAD-208ENST00000479002 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
CAD-208ENST00000479002 MT1LQ93083 61 aa5.78□□□□□ -1.48
CAD-208ENST00000479002 SPRR2DP22532 72 aa5.77□□□□□ -1.49
CAD-208ENST00000479002 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
CAD-208ENST00000479002 MT1GP13640 62 aa5.75□□□□□ -1.49
CAD-208ENST00000479002 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
CAD-208ENST00000479002 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CAD-208ENST00000479002 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CAD-208ENST00000479002 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
CAD-208ENST00000479002 MT1MQ8N339 61 aa5.65□□□□□ -1.5
CAD-208ENST00000479002 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
CAD-208ENST00000479002 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
CAD-208ENST00000479002 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
CAD-208ENST00000479002 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
CAD-208ENST00000479002 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
CAD-208ENST00000479002 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
CAD-208ENST00000479002 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
CAD-208ENST00000479002 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
CAD-208ENST00000479002 LCE3CQ5T5A8 94 aa5.42□□□□□ -1.54
CAD-208ENST00000479002 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
CAD-208ENST00000479002 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
CAD-208ENST00000479002 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
CAD-208ENST00000479002 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
CAD-208ENST00000479002 KRTAP5-4Q6L8H1 288 aa5.16□□□□□ -1.58
CAD-208ENST00000479002 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
CAD-208ENST00000479002 LCE4AQ5TA78 99 aa5.15□□□□□ -1.59
CAD-208ENST00000479002 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
CAD-208ENST00000479002 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
CAD-208ENST00000479002 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
CAD-208ENST00000479002 MT4P47944 62 aa5□□□□□ -1.61
CAD-208ENST00000479002 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
CAD-208ENST00000479002 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CAD-208ENST00000479002 MT1AP04731 61 aa4.92□□□□□ -1.62
CAD-208ENST00000479002 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
CAD-208ENST00000479002 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
CAD-208ENST00000479002 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
CAD-208ENST00000479002 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
CAD-208ENST00000479002 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
CAD-208ENST00000479002 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
CAD-208ENST00000479002 H3BS24 57 aa4.71□□□□□ -1.66
CAD-208ENST00000479002 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
CAD-208ENST00000479002 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
CAD-208ENST00000479002 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
CAD-208ENST00000479002 KRTAP5-10Q6L8G5 202 aa4.56□□□□□ -1.68
CAD-208ENST00000479002 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
CAD-208ENST00000479002 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
CAD-208ENST00000479002 MT3P25713 68 aa4.48□□□□□ -1.69
CAD-208ENST00000479002 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
CAD-208ENST00000479002 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
CAD-208ENST00000479002 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
CAD-208ENST00000479002 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
CAD-208ENST00000479002 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
CAD-208ENST00000479002 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
CAD-208ENST00000479002 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
CAD-208ENST00000479002 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
CAD-208ENST00000479002 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
CAD-208ENST00000479002 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
CAD-208ENST00000479002 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
CAD-208ENST00000479002 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
CAD-208ENST00000479002 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CAD-208ENST00000479002 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
CAD-208ENST00000479002 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
CAD-208ENST00000479002 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
CAD-208ENST00000479002 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
CAD-208ENST00000479002 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
CAD-208ENST00000479002 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
CAD-208ENST00000479002 INE1O15225 51 aa3.32□□□□□ -1.88
CAD-208ENST00000479002 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
CAD-208ENST00000479002 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
CAD-208ENST00000479002 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
CAD-208ENST00000479002 PRM1P04553 51 aa3.1□□□□□ -1.91
CAD-208ENST00000479002 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
CAD-208ENST00000479002 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
CAD-208ENST00000479002 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
CAD-208ENST00000479002 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CAD-208ENST00000479002 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 160.7 ms