RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 TMEM258P61165 79 aa1.37□□□□□ -2.19
NCK1-206ENST00000478862 LINC01554Q52M75 96 aa1.36□□□□□ -2.19
NCK1-206ENST00000478862 SPATA8Q6RVD6 105 aa1.36□□□□□ -2.19
NCK1-206ENST00000478862 SPTSSBQ8NFR3 76 aa1.36□□□□□ -2.19
NCK1-206ENST00000478862 SERP1Q9Y6X1 66 aa1.36□□□□□ -2.19
NCK1-206ENST00000478862 A0A0D9SG42 100 aa1.35□□□□□ -2.19
NCK1-206ENST00000478862 A0A1B0GU69 56 aa1.34□□□□□ -2.19
NCK1-206ENST00000478862 ATP5EP56381 51 aaPredicted RBP1.34□□□□□ -2.19
NCK1-206ENST00000478862 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
NCK1-206ENST00000478862 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
NCK1-206ENST00000478862 M0QZ58 72 aa1.33□□□□□ -2.2
NCK1-206ENST00000478862 LINC01558Q9Y6Z2 57 aa1.32□□□□□ -2.2
NCK1-206ENST00000478862 RPS28P62857 69 aaKnown RBP1.31□□□□□ -2.2
NCK1-206ENST00000478862 Q1T7F1 81 aa1.3□□□□□ -2.2
NCK1-206ENST00000478862 H0YAA0 97 aa1.29□□□□□ -2.2
NCK1-206ENST00000478862 Q5VV11 94 aa1.29□□□□□ -2.2
NCK1-206ENST00000478862 USH2AO75445 5202 aa1.29□□□□□ -2.2
NCK1-206ENST00000478862 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
NCK1-206ENST00000478862 MT1BP07438 61 aa1.28□□□□□ -2.2
NCK1-206ENST00000478862 PLAC4Q8WY50 150 aa1.28□□□□□ -2.2
NCK1-206ENST00000478862 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
NCK1-206ENST00000478862 UQCR11O14957 56 aa1.27□□□□□ -2.21
NCK1-206ENST00000478862 MIR22HGQ0VDD5 57 aa1.27□□□□□ -2.21
NCK1-206ENST00000478862 PRO2289Q9P1D8 64 aa1.27□□□□□ -2.21
NCK1-206ENST00000478862 CRIPTQ9P021 101 aa1.26□□□□□ -2.21
NCK1-206ENST00000478862 KRTAP19-8Q3LI54 63 aa1.25□□□□□ -2.21
NCK1-206ENST00000478862 SSPOA2VEC9 5147 aa1.24□□□□□ -2.21
NCK1-206ENST00000478862 A6NN06 94 aa1.23□□□□□ -2.21
NCK1-206ENST00000478862 MT1XP80297 61 aa1.23□□□□□ -2.21
NCK1-206ENST00000478862 BRK1Q8WUW1 75 aa1.23□□□□□ -2.21
NCK1-206ENST00000478862 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
NCK1-206ENST00000478862 CDC42SE1Q9NRR8 79 aa1.21□□□□□ -2.22
NCK1-206ENST00000478862 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
NCK1-206ENST00000478862 PMAIP1Q13794 54 aa1.17□□□□□ -2.22
NCK1-206ENST00000478862 KMT2DO14686 5537 aa1.17□□□□□ -2.22
NCK1-206ENST00000478862 KTN1-AS1Q86SY8 53 aa1.16□□□□□ -2.22
NCK1-206ENST00000478862 TNP1P09430 55 aa1.15□□□□□ -2.23
NCK1-206ENST00000478862 ROMO1P60602 79 aa1.15□□□□□ -2.23
NCK1-206ENST00000478862 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
NCK1-206ENST00000478862 KRTAP19-5Q3LI72 72 aa1.13□□□□□ -2.23
NCK1-206ENST00000478862 SPRR2FQ96RM1 72 aa1.12□□□□□ -2.23
NCK1-206ENST00000478862 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
NCK1-206ENST00000478862 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
NCK1-206ENST00000478862 NEBP20929 6669 aa1.09□□□□□ -2.23
NCK1-206ENST00000478862 KRTAP20-1Q3LI63 56 aa1.09□□□□□ -2.23
NCK1-206ENST00000478862 KRTAP19-7Q3SYF9 63 aa1.09□□□□□ -2.23
NCK1-206ENST00000478862 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.24
NCK1-206ENST00000478862 SPRR2EP22531 72 aa1.08□□□□□ -2.24
NCK1-206ENST00000478862 SPRR2BP35325 72 aa1.08□□□□□ -2.24
NCK1-206ENST00000478862 SPRR2AP35326 72 aa1.08□□□□□ -2.24
NCK1-206ENST00000478862 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
NCK1-206ENST00000478862 MT1EP04732 61 aa1.06□□□□□ -2.24
NCK1-206ENST00000478862 MT1LQ93083 61 aa1.04□□□□□ -2.24
NCK1-206ENST00000478862 SPRR2DP22532 72 aa1.03□□□□□ -2.24
NCK1-206ENST00000478862 KRTAP19-3Q7Z4W3 81 aa1.03□□□□□ -2.24
NCK1-206ENST00000478862 MT1MQ8N339 61 aa1.02□□□□□ -2.25
NCK1-206ENST00000478862 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
NCK1-206ENST00000478862 MT1GP13640 62 aa1.01□□□□□ -2.25
NCK1-206ENST00000478862 KRTAP2-3P0C7H8 128 aa1□□□□□ -2.25
NCK1-206ENST00000478862 KRTAP2-4Q9BYR9 128 aa1□□□□□ -2.25
NCK1-206ENST00000478862 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
NCK1-206ENST00000478862 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
NCK1-206ENST00000478862 KRTAP2-1Q9BYU5 128 aa0.96□□□□□ -2.26
NCK1-206ENST00000478862 MT4P47944 62 aa0.94□□□□□ -2.26
NCK1-206ENST00000478862 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
NCK1-206ENST00000478862 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
NCK1-206ENST00000478862 MT1AP04731 61 aa0.87□□□□□ -2.27
NCK1-206ENST00000478862 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
NCK1-206ENST00000478862 KRTAP20-2Q3LI61 65 aa0.84□□□□□ -2.27
NCK1-206ENST00000478862 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
NCK1-206ENST00000478862 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
NCK1-206ENST00000478862 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
NCK1-206ENST00000478862 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
NCK1-206ENST00000478862 INE1O15225 51 aa0.73□□□□□ -2.29
NCK1-206ENST00000478862 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
NCK1-206ENST00000478862 PRM1P04553 51 aa0.63□□□□□ -2.31
NCK1-206ENST00000478862 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
NCK1-206ENST00000478862 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 81 ms