RNA–Protein interactions for RNA: ENST00000478070.1

MDM2-217, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-217ENST00000478070 SPINK6Q6UWN8 80 aa1.08□□□□□ -2.24
MDM2-217ENST00000478070 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
MDM2-217ENST00000478070 USH2AO75445 5202 aa1.08□□□□□ -2.24
MDM2-217ENST00000478070 LRP1BQ9NZR2 4599 aa1.07□□□□□ -2.24
MDM2-217ENST00000478070 A0A096LNI7 61 aa1.07□□□□□ -2.24
MDM2-217ENST00000478070 C9orf92A6NGG3 77 aa1.07□□□□□ -2.24
MDM2-217ENST00000478070 KMT2DO14686 5537 aa1.07□□□□□ -2.24
MDM2-217ENST00000478070 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
MDM2-217ENST00000478070 A0A096LPF7 62 aa1.06□□□□□ -2.24
MDM2-217ENST00000478070 RPS29P62273 56 aaKnown RBP1.06□□□□□ -2.24
MDM2-217ENST00000478070 VPS13DQ5THJ4 4388 aa1.04□□□□□ -2.24
MDM2-217ENST00000478070 SPART-AS1P0CW21 52 aa1.04□□□□□ -2.24
MDM2-217ENST00000478070 DEFB135Q30KP9 77 aa1.04□□□□□ -2.24
MDM2-217ENST00000478070 DNAH6Q9C0G6 4158 aa1.04□□□□□ -2.24
MDM2-217ENST00000478070 LRP1Q07954 4544 aaKnown RBP1.04□□□□□ -2.24
MDM2-217ENST00000478070 DNAH3Q8TD57 4116 aa1.04□□□□□ -2.24
MDM2-217ENST00000478070 APOBP04114 4563 aaKnown RBP1.03□□□□□ -2.24
MDM2-217ENST00000478070 MUC12Q9UKN1 5478 aa1.02□□□□□ -2.25
MDM2-217ENST00000478070 DEFB133Q30KQ1 61 aa1.02□□□□□ -2.25
MDM2-217ENST00000478070 DNAH5Q8TE73 4624 aa1.02□□□□□ -2.25
MDM2-217ENST00000478070 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
MDM2-217ENST00000478070 HRNRQ86YZ3 2850 aaPredicted RBP1.01□□□□□ -2.25
MDM2-217ENST00000478070 KRTAP2-3P0C7H8 128 aa1.01□□□□□ -2.25
MDM2-217ENST00000478070 KRTAP2-4Q9BYR9 128 aa1.01□□□□□ -2.25
MDM2-217ENST00000478070 KRTAP2-1Q9BYU5 128 aa1.01□□□□□ -2.25
MDM2-217ENST00000478070 PKD1P98161 4303 aa1.01□□□□□ -2.25
MDM2-217ENST00000478070 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
MDM2-217ENST00000478070 DNAH2Q9P225 4427 aa0.99□□□□□ -2.25
MDM2-217ENST00000478070 M0R2T5 61 aa0.99□□□□□ -2.25
MDM2-217ENST00000478070 VPS13BQ7Z7G8 4022 aa0.98□□□□□ -2.25
MDM2-217ENST00000478070 MDN1Q9NU22 5596 aa0.97□□□□□ -2.25
MDM2-217ENST00000478070 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
MDM2-217ENST00000478070 U3KQA8 63 aa0.96□□□□□ -2.26
MDM2-217ENST00000478070 DNAH17Q9UFH2 4485 aa0.95□□□□□ -2.26
MDM2-217ENST00000478070 TNXBP22105 4242 aa0.93□□□□□ -2.26
MDM2-217ENST00000478070 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
MDM2-217ENST00000478070 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
MDM2-217ENST00000478070 HTN3P15516 51 aa0.91□□□□□ -2.26
MDM2-217ENST00000478070 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
MDM2-217ENST00000478070 LPAP08519 4548 aa0.89□□□□□ -2.27
MDM2-217ENST00000478070 DNAH8Q96JB1 4490 aa0.88□□□□□ -2.27
MDM2-217ENST00000478070 FLGP20930 4061 aaPredicted RBP0.87□□□□□ -2.27
MDM2-217ENST00000478070 DEFB4AO15263 64 aa0.85□□□□□ -2.27
MDM2-217ENST00000478070 MUC17Q685J3 4493 aa0.84□□□□□ -2.28
MDM2-217ENST00000478070 SMR3BP02814 79 aaPredicted RBP0.81□□□□□ -2.28
MDM2-217ENST00000478070 PRM1P04553 51 aa0.81□□□□□ -2.28
MDM2-217ENST00000478070 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
MDM2-217ENST00000478070 MT1AP04731 61 aa0.8□□□□□ -2.28
MDM2-217ENST00000478070 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
MDM2-217ENST00000478070 SPRR2BP35325 72 aa0.75□□□□□ -2.29
MDM2-217ENST00000478070 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
MDM2-217ENST00000478070 SPRR2DP22532 72 aa0.73□□□□□ -2.29
MDM2-217ENST00000478070 SPRR2AP35326 72 aa0.73□□□□□ -2.29
MDM2-217ENST00000478070 MT1HL1P0DM35 61 aa0.72□□□□□ -2.29
MDM2-217ENST00000478070 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
MDM2-217ENST00000478070 SPRR2EP22531 72 aa0.7□□□□□ -2.3
MDM2-217ENST00000478070 SPRR2GQ9BYE4 73 aa0.7□□□□□ -2.3
MDM2-217ENST00000478070 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
MDM2-217ENST00000478070 MT1EP04732 61 aa0.67□□□□□ -2.3
MDM2-217ENST00000478070 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
MDM2-217ENST00000478070 MT4P47944 62 aa0.66□□□□□ -2.3
MDM2-217ENST00000478070 MT1HP80294 61 aa0.66□□□□□ -2.3
MDM2-217ENST00000478070 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
MDM2-217ENST00000478070 MT1LQ93083 61 aa0.64□□□□□ -2.31
MDM2-217ENST00000478070 KRTAP19-2Q3LHN2 52 aa0.61□□□□□ -2.31
MDM2-217ENST00000478070 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
MDM2-217ENST00000478070 MT1XP80297 61 aa0.59□□□□□ -2.31
MDM2-217ENST00000478070 SYNE1Q8NF91 8797 aaKnown RBP0.57□□□□□ -2.32
MDM2-217ENST00000478070 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
MDM2-217ENST00000478070 MT1FP04733 61 aa0.52□□□□□ -2.33
MDM2-217ENST00000478070 KRTAP19-7Q3SYF9 63 aa0.52□□□□□ -2.33
MDM2-217ENST00000478070 MT2AP02795 61 aa0.5□□□□□ -2.33
MDM2-217ENST00000478070 MT1BP07438 61 aa0.49□□□□□ -2.33
MDM2-217ENST00000478070 KRTAP20-2Q3LI61 65 aa0.49□□□□□ -2.33
MDM2-217ENST00000478070 MT1MQ8N339 61 aa0.46□□□□□ -2.34
MDM2-217ENST00000478070 MT1GP13640 62 aa0.45□□□□□ -2.34
MDM2-217ENST00000478070 KRTAP6-1Q3LI64 71 aa0.42□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 83.3 ms