RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
TMED4-204ENST00000477639 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
TMED4-204ENST00000477639 KRTAP9-6A8MVA2 160 aa7.26□□□□□ -1.25
TMED4-204ENST00000477639 MUC12Q9UKN1 5478 aa7.24□□□□□ -1.25
TMED4-204ENST00000477639 MT1EP04732 61 aa7.24□□□□□ -1.25
TMED4-204ENST00000477639 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
TMED4-204ENST00000477639 MT1LQ93083 61 aa7.21□□□□□ -1.26
TMED4-204ENST00000477639 KRTAP4-7Q9BYR0 210 aa7.2□□□□□ -1.26
TMED4-204ENST00000477639 KRTAP5-9P26371 169 aa7.19□□□□□ -1.26
TMED4-204ENST00000477639 INE1O15225 51 aa7.18□□□□□ -1.26
TMED4-204ENST00000477639 NEBP20929 6669 aa7.13□□□□□ -1.27
TMED4-204ENST00000477639 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
TMED4-204ENST00000477639 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
TMED4-204ENST00000477639 KRTAP2-3P0C7H8 128 aa6.98□□□□□ -1.29
TMED4-204ENST00000477639 KRTAP2-4Q9BYR9 128 aa6.98□□□□□ -1.29
TMED4-204ENST00000477639 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
TMED4-204ENST00000477639 SPRR2EP22531 72 aa6.95□□□□□ -1.3
TMED4-204ENST00000477639 SPRR2BP35325 72 aa6.95□□□□□ -1.3
TMED4-204ENST00000477639 SPRR2AP35326 72 aa6.95□□□□□ -1.3
TMED4-204ENST00000477639 KRTAP20-1Q3LI63 56 aa6.85□□□□□ -1.31
TMED4-204ENST00000477639 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
TMED4-204ENST00000477639 KRTAP4-3Q9BYR4 195 aa6.79□□□□□ -1.32
TMED4-204ENST00000477639 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
TMED4-204ENST00000477639 MT1MQ8N339 61 aa6.77□□□□□ -1.33
TMED4-204ENST00000477639 MT1GP13640 62 aa6.75□□□□□ -1.33
TMED4-204ENST00000477639 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.33
TMED4-204ENST00000477639 SPRR2DP22532 72 aa6.7□□□□□ -1.34
TMED4-204ENST00000477639 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
TMED4-204ENST00000477639 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
TMED4-204ENST00000477639 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
TMED4-204ENST00000477639 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
TMED4-204ENST00000477639 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
TMED4-204ENST00000477639 MT1AP04731 61 aa6.07□□□□□ -1.44
TMED4-204ENST00000477639 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
TMED4-204ENST00000477639 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
TMED4-204ENST00000477639 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
TMED4-204ENST00000477639 LCE4AQ5TA78 99 aa5.89□□□□□ -1.47
TMED4-204ENST00000477639 MT4P47944 62 aa5.88□□□□□ -1.47
TMED4-204ENST00000477639 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
TMED4-204ENST00000477639 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
TMED4-204ENST00000477639 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
TMED4-204ENST00000477639 HMCN1Q96RW7 5635 aa5.76□□□□□ -1.49
TMED4-204ENST00000477639 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
TMED4-204ENST00000477639 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
TMED4-204ENST00000477639 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.49
TMED4-204ENST00000477639 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
TMED4-204ENST00000477639 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
TMED4-204ENST00000477639 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
TMED4-204ENST00000477639 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
TMED4-204ENST00000477639 AHNAK2Q8IVF2 5795 aa5.46□□□□□ -1.54
TMED4-204ENST00000477639 MT3P25713 68 aa5.45□□□□□ -1.54
TMED4-204ENST00000477639 PRM1P04553 51 aa5.35□□□□□ -1.55
TMED4-204ENST00000477639 KRTAP5-10Q6L8G5 202 aa5.32□□□□□ -1.56
TMED4-204ENST00000477639 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
TMED4-204ENST00000477639 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
TMED4-204ENST00000477639 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
TMED4-204ENST00000477639 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
TMED4-204ENST00000477639 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
TMED4-204ENST00000477639 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
TMED4-204ENST00000477639 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
TMED4-204ENST00000477639 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
TMED4-204ENST00000477639 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
TMED4-204ENST00000477639 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
TMED4-204ENST00000477639 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
TMED4-204ENST00000477639 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
TMED4-204ENST00000477639 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
TMED4-204ENST00000477639 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
TMED4-204ENST00000477639 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
TMED4-204ENST00000477639 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
TMED4-204ENST00000477639 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
TMED4-204ENST00000477639 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.77
TMED4-204ENST00000477639 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
TMED4-204ENST00000477639 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
TMED4-204ENST00000477639 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
TMED4-204ENST00000477639 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.87
TMED4-204ENST00000477639 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
TMED4-204ENST00000477639 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
TMED4-204ENST00000477639 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 61.7 ms