RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 CAMK2N1Q7Z7J9 78 aa1.96□□□□□ -2.1
NSMCE4A-208ENST00000477289 LINC01558Q9Y6Z2 57 aa1.96□□□□□ -2.1
NSMCE4A-208ENST00000477289 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
NSMCE4A-208ENST00000477289 A6NN06 94 aa1.95□□□□□ -2.1
NSMCE4A-208ENST00000477289 UQCR11O14957 56 aa1.95□□□□□ -2.1
NSMCE4A-208ENST00000477289 A0A0D9SG42 100 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 K7ERS5 55 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 RPS28P62857 69 aaKnown RBP1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 KRTAP19-6Q3LI70 58 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
NSMCE4A-208ENST00000477289 MT1BP07438 61 aa1.92□□□□□ -2.1
NSMCE4A-208ENST00000477289 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
NSMCE4A-208ENST00000477289 Q1T7F1 81 aa1.91□□□□□ -2.1
NSMCE4A-208ENST00000477289 PSPHP1O15172 72 aa1.9□□□□□ -2.11
NSMCE4A-208ENST00000477289 MIR22HGQ0VDD5 57 aa1.9□□□□□ -2.11
NSMCE4A-208ENST00000477289 USH2AO75445 5202 aa1.9□□□□□ -2.11
NSMCE4A-208ENST00000477289 A6NED7 52 aa1.89□□□□□ -2.11
NSMCE4A-208ENST00000477289 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
NSMCE4A-208ENST00000477289 KRTAP13-4Q3LI77 160 aa1.88□□□□□ -2.11
NSMCE4A-208ENST00000477289 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
NSMCE4A-208ENST00000477289 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
NSMCE4A-208ENST00000477289 MT1XP80297 61 aa1.83□□□□□ -2.12
NSMCE4A-208ENST00000477289 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
NSMCE4A-208ENST00000477289 TNP1P09430 55 aa1.81□□□□□ -2.12
NSMCE4A-208ENST00000477289 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
NSMCE4A-208ENST00000477289 CDC42SE1Q9NRR8 79 aa1.8□□□□□ -2.12
NSMCE4A-208ENST00000477289 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
NSMCE4A-208ENST00000477289 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
NSMCE4A-208ENST00000477289 BRK1Q8WUW1 75 aa1.76□□□□□ -2.13
NSMCE4A-208ENST00000477289 MACF1Q9UPN3 7388 aaKnown RBP1.75□□□□□ -2.13
NSMCE4A-208ENST00000477289 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
NSMCE4A-208ENST00000477289 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
NSMCE4A-208ENST00000477289 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
NSMCE4A-208ENST00000477289 ROMO1P60602 79 aa1.73□□□□□ -2.13
NSMCE4A-208ENST00000477289 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
NSMCE4A-208ENST00000477289 SPRR2EP22531 72 aa1.69□□□□□ -2.14
NSMCE4A-208ENST00000477289 SPRR2BP35325 72 aa1.69□□□□□ -2.14
NSMCE4A-208ENST00000477289 SPRR2AP35326 72 aa1.69□□□□□ -2.14
NSMCE4A-208ENST00000477289 PMAIP1Q13794 54 aa1.67□□□□□ -2.14
NSMCE4A-208ENST00000477289 PRO0628Q9UI54 55 aa1.66□□□□□ -2.14
NSMCE4A-208ENST00000477289 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
NSMCE4A-208ENST00000477289 SPRR2DP22532 72 aa1.64□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
NSMCE4A-208ENST00000477289 LUZP6Q538Z0 58 aa1.64□□□□□ -2.15
NSMCE4A-208ENST00000477289 KMT2DO14686 5537 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 MT1EP04732 61 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
NSMCE4A-208ENST00000477289 MT1GP13640 62 aa1.61□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 NEBP20929 6669 aa1.6□□□□□ -2.15
NSMCE4A-208ENST00000477289 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
NSMCE4A-208ENST00000477289 MT1LQ93083 61 aa1.58□□□□□ -2.16
NSMCE4A-208ENST00000477289 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
NSMCE4A-208ENST00000477289 MT1MQ8N339 61 aa1.54□□□□□ -2.16
NSMCE4A-208ENST00000477289 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
NSMCE4A-208ENST00000477289 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
NSMCE4A-208ENST00000477289 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
NSMCE4A-208ENST00000477289 MT4P47944 62 aa1.4□□□□□ -2.19
NSMCE4A-208ENST00000477289 MT1AP04731 61 aa1.36□□□□□ -2.19
NSMCE4A-208ENST00000477289 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
NSMCE4A-208ENST00000477289 KRTAP6-1Q3LI64 71 aa1.31□□□□□ -2.2
NSMCE4A-208ENST00000477289 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
NSMCE4A-208ENST00000477289 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
NSMCE4A-208ENST00000477289 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
NSMCE4A-208ENST00000477289 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
NSMCE4A-208ENST00000477289 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
NSMCE4A-208ENST00000477289 INE1O15225 51 aa1□□□□□ -2.25
NSMCE4A-208ENST00000477289 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
NSMCE4A-208ENST00000477289 MUC5ACP98088 5654 aa1□□□□□ -2.25
NSMCE4A-208ENST00000477289 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
NSMCE4A-208ENST00000477289 PRM1P04553 51 aa0.87□□□□□ -2.27
NSMCE4A-208ENST00000477289 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
NSMCE4A-208ENST00000477289 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
NSMCE4A-208ENST00000477289 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 1469.1 ms